RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TRBV7-6A0A0J9YX20 115 aa14.42□□□□□ -0.1
RAB40C-212ENST00000569575 RPL28P46779 137 aaKnown RBP14.42□□□□□ -0.1
RAB40C-212ENST00000569575 KRTAP10-4P60372 401 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-212ENST00000569575 PRO1854Q9UHT4 67 aa14.42□□□□□ -0.1
RAB40C-212ENST00000569575 A0A1B0GWB2 263 aa14.41□□□□□ -0.1
RAB40C-212ENST00000569575 BVES-AS1Q5T3Y7 98 aa14.41□□□□□ -0.1
RAB40C-212ENST00000569575 ETDCA0A1B0GVM5 59 aa14.4□□□□□ -0.1
RAB40C-212ENST00000569575 KRTAP4-16G5E9R7 235 aaPredicted RBP14.4□□□□□ -0.1
RAB40C-212ENST00000569575 DIRC1Q969H9 104 aa14.4□□□□□ -0.1
RAB40C-212ENST00000569575 ZNF861PO60384 105 aa14.39□□□□□ -0.11
RAB40C-212ENST00000569575 KIAA1109Q2LD37 5005 aa14.38□□□□□ -0.11
RAB40C-212ENST00000569575 UBE2AP49459 152 aa14.38□□□□□ -0.11
RAB40C-212ENST00000569575 SPINK6Q6UWN8 80 aa14.38□□□□□ -0.11
RAB40C-212ENST00000569575 FAM19A1Q7Z5A9 133 aa14.38□□□□□ -0.11
RAB40C-212ENST00000569575 HSPG2P98160 4391 aa14.37□□□□□ -0.11
RAB40C-212ENST00000569575 RPL13AP40429 203 aaKnown RBP14.37□□□□□ -0.11
RAB40C-212ENST00000569575 NHP2Q9NX24 153 aaKnown RBP14.37□□□□□ -0.11
RAB40C-212ENST00000569575 RYR1P21817 5038 aa14.37□□□□□ -0.11
RAB40C-212ENST00000569575 VAMP3Q15836 100 aa14.36□□□□□ -0.11
RAB40C-212ENST00000569575 KRTAP13-1Q8IUC0 172 aa14.35□□□□□ -0.11
RAB40C-212ENST00000569575 SMIM11BQ8TCY0 68 aa14.35□□□□□ -0.11
RAB40C-212ENST00000569575 B5MCH6 92 aa14.34□□□□□ -0.11
RAB40C-212ENST00000569575 C6orf99Q4VX62 202 aa14.34□□□□□ -0.11
RAB40C-212ENST00000569575 Q6ZRX8 168 aa14.34□□□□□ -0.11
RAB40C-212ENST00000569575 INAFM2P0DMQ5 153 aa14.32□□□□□ -0.12
RAB40C-212ENST00000569575 COX7BP24311 80 aa14.3□□□□□ -0.12
RAB40C-212ENST00000569575 ELOF1P60002 83 aaKnown RBP14.3□□□□□ -0.12
RAB40C-212ENST00000569575 KRTAP17-1Q9BYP8 105 aa14.29□□□□□ -0.12
RAB40C-212ENST00000569575 DHRS4-AS1Q9P1J3 65 aa14.29□□□□□ -0.12
RAB40C-212ENST00000569575 PRLHP81277 87 aa14.28□□□□□ -0.12
RAB40C-212ENST00000569575 Q1RN00 199 aa14.27□□□□□ -0.13
RAB40C-212ENST00000569575 H0YGX0 51 aa14.26□□□□□ -0.13
RAB40C-212ENST00000569575 H7C2G1 150 aa14.24□□□□□ -0.13
RAB40C-212ENST00000569575 SNCGO76070 127 aa14.23□□□□□ -0.13
RAB40C-212ENST00000569575 COX6CP09669 75 aa14.23□□□□□ -0.13
RAB40C-212ENST00000569575 HIGD2AQ9BW72 106 aa14.23□□□□□ -0.13
RAB40C-212ENST00000569575 VPS13BQ7Z7G8 4022 aa14.23□□□□□ -0.13
RAB40C-212ENST00000569575 K7ERJ3 54 aa14.22□□□□□ -0.13
RAB40C-212ENST00000569575 SLC25A20O43772 301 aa14.22□□□□□ -0.13
RAB40C-212ENST00000569575 ZNF706Q9Y5V0 76 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-212ENST00000569575 FAT1Q14517 4588 aa14.2□□□□□ -0.14
RAB40C-212ENST00000569575 SMCR5Q8TEV8 140 aa14.2□□□□□ -0.14
RAB40C-212ENST00000569575 Q9BRP9 147 aa14.2□□□□□ -0.14
RAB40C-212ENST00000569575 TSPAN13O95857 204 aa14.18□□□□□ -0.14
RAB40C-212ENST00000569575 SRRM2Q9UQ35 2752 aaKnown RBP14.18□□□□□ -0.14
RAB40C-212ENST00000569575 PSMB2P49721 201 aa14.17□□□□□ -0.14
RAB40C-212ENST00000569575 BATFQ16520 125 aa14.17□□□□□ -0.14
RAB40C-212ENST00000569575 A0A1B0GX51 115 aa14.16□□□□□ -0.14
RAB40C-212ENST00000569575 LINC00575Q6W349 94 aa14.16□□□□□ -0.14
RAB40C-212ENST00000569575 KRTAP4-5Q9BYR2 181 aa14.16□□□□□ -0.14
RAB40C-212ENST00000569575 PCP4L1A6NKN8 68 aa14.13□□□□□ -0.15
RAB40C-212ENST00000569575 TRIAP1O43715 76 aa14.13□□□□□ -0.15
RAB40C-212ENST00000569575 HERC2O95714 4834 aa14.12□□□□□ -0.15
RAB40C-212ENST00000569575 hADV29S1A0JD25 119 aa14.12□□□□□ -0.15
RAB40C-212ENST00000569575 SNHG12Q9BXW3 62 aa14.11□□□□□ -0.15
RAB40C-212ENST00000569575 GHRHP01286 108 aa14.1□□□□□ -0.15
RAB40C-212ENST00000569575 FAM229BQ4G0N7 80 aa14.1□□□□□ -0.15
RAB40C-212ENST00000569575 LYRM7Q5U5X0 104 aa14.1□□□□□ -0.15
RAB40C-212ENST00000569575 SPRR4Q96PI1 79 aa14.1□□□□□ -0.15
RAB40C-212ENST00000569575 OXTP01178 125 aa14.09□□□□□ -0.15
RAB40C-212ENST00000569575 ERC2-IT1O76042 136 aa14.08□□□□□ -0.16
RAB40C-212ENST00000569575 COL5A1-AS1Q5SY13 56 aa14.08□□□□□ -0.16
RAB40C-212ENST00000569575 SCGB1C2P0DMR2 95 aa14.07□□□□□ -0.16
RAB40C-212ENST00000569575 OCIAD2Q56VL3 154 aa14.07□□□□□ -0.16
RAB40C-212ENST00000569575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-212ENST00000569575 KRTAP1-4P0C5Y4 121 aa14.06□□□□□ -0.16
RAB40C-212ENST00000569575 LINC00483Q53H64 154 aa14.06□□□□□ -0.16
RAB40C-212ENST00000569575 SPRR1BP22528 89 aa14.05□□□□□ -0.16
RAB40C-212ENST00000569575 LINC01600Q96MT4 127 aa14.05□□□□□ -0.16
RAB40C-212ENST00000569575 C9orf118A6NHY6 69 aa14.04□□□□□ -0.16
RAB40C-212ENST00000569575 PPDPFLQ8WWR9 84 aa14.04□□□□□ -0.16
RAB40C-212ENST00000569575 H3BQ85 93 aa14.03□□□□□ -0.16
RAB40C-212ENST00000569575 IGLV5-48A0A075B6I7 105 aa14.02□□□□□ -0.17
RAB40C-212ENST00000569575 TEX49A0A1B0GTD5 131 aa14.02□□□□□ -0.17
RAB40C-212ENST00000569575 CRYGAP11844 174 aa14.02□□□□□ -0.17
RAB40C-212ENST00000569575 TAX1BP3O14907 124 aa14.01□□□□□ -0.17
RAB40C-212ENST00000569575 KRTAP29-1A8MX34 341 aaPredicted RBP14□□□□□ -0.17
RAB40C-212ENST00000569575 GAGE2AQ6NT46 116 aa14□□□□□ -0.17
RAB40C-212ENST00000569575 TRBV20-1A0A075B6N2 111 aa13.99□□□□□ -0.17
RAB40C-212ENST00000569575 TRACP01848 142 aa13.99□□□□□ -0.17
RAB40C-212ENST00000569575 FAM218AQ96MZ4 157 aa13.99□□□□□ -0.17
RAB40C-212ENST00000569575 DNAL4O96015 105 aa13.98□□□□□ -0.17
RAB40C-212ENST00000569575 Q6ZQY7 126 aa13.98□□□□□ -0.17
RAB40C-212ENST00000569575 ST20-AS1Q8NBB2 130 aa13.98□□□□□ -0.17
RAB40C-212ENST00000569575 FLG2Q5D862 2391 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-212ENST00000569575 H3BUT2 72 aa13.97□□□□□ -0.17
RAB40C-212ENST00000569575 LST1O00453 97 aa13.97□□□□□ -0.17
RAB40C-212ENST00000569575 CLEC2BQ92478 149 aa13.97□□□□□ -0.17
RAB40C-212ENST00000569575 ATXN8Q156A1 80 aa13.94□□□□□ -0.18
RAB40C-212ENST00000569575 LAMTOR3Q9UHA4 124 aa13.94□□□□□ -0.18
RAB40C-212ENST00000569575 LINC01547P58512 204 aaPredicted RBP13.93□□□□□ -0.18
RAB40C-212ENST00000569575 A0A1W2PPM0 123 aa13.92□□□□□ -0.18
RAB40C-212ENST00000569575 FABP2P12104 132 aa13.92□□□□□ -0.18
RAB40C-212ENST00000569575 DEFB105AQ8NG35 78 aa13.92□□□□□ -0.18
RAB40C-212ENST00000569575 Q8N377 158 aa13.91□□□□□ -0.18
RAB40C-212ENST00000569575 PKHD1L1Q86WI1 4243 aa13.9□□□□□ -0.18
RAB40C-212ENST00000569575 KRTAP10-8P60410 259 aa13.9□□□□□ -0.18
RAB40C-212ENST00000569575 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
RAB40C-212ENST00000569575 ORMDL1Q9P0S3 153 aa13.9□□□□□ -0.18
RAB40C-212ENST00000569575 PRR26Q8N8Z3 221 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms