RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 IGLV1-50A0A075B6I6 118 aa5.56□□□□□ -1.52
CAPN3-219ENST00000569136 M0R378 163 aa5.56□□□□□ -1.52
CAPN3-219ENST00000569136 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
CAPN3-219ENST00000569136 IGKV2D-26A0A0A0MRZ7 120 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 A0A0U1RRA0 63 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 E9PLD3 99 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 M0R143 59 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 LINC01545Q5VT33 79 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 MIR7-3HGQ8N6C7 128 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 PMCHL2Q9BQD1 86 aa5.55□□□□□ -1.52
CAPN3-219ENST00000569136 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
CAPN3-219ENST00000569136 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
CAPN3-219ENST00000569136 C20orf202A1L168 122 aa5.53□□□□□ -1.52
CAPN3-219ENST00000569136 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
CAPN3-219ENST00000569136 UBE2AP49459 152 aa5.53□□□□□ -1.52
CAPN3-219ENST00000569136 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
CAPN3-219ENST00000569136 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
CAPN3-219ENST00000569136 C3orf79P0CE67 100 aa5.52□□□□□ -1.53
CAPN3-219ENST00000569136 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
CAPN3-219ENST00000569136 PRO1933Q9H354 126 aa5.52□□□□□ -1.53
CAPN3-219ENST00000569136 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
CAPN3-219ENST00000569136 DLEU1O43261 78 aa5.51□□□□□ -1.53
CAPN3-219ENST00000569136 KRTDAPP60985 99 aa5.51□□□□□ -1.53
CAPN3-219ENST00000569136 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
CAPN3-219ENST00000569136 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
CAPN3-219ENST00000569136 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 TIMM17BO60830 172 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 NDUFC2O95298 119 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
CAPN3-219ENST00000569136 TNXBP22105 4242 aa5.49□□□□□ -1.53
CAPN3-219ENST00000569136 CRYGAP11844 174 aa5.49□□□□□ -1.53
CAPN3-219ENST00000569136 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
CAPN3-219ENST00000569136 FAM19A1Q7Z5A9 133 aa5.49□□□□□ -1.53
CAPN3-219ENST00000569136 Q8NDZ9 215 aa5.49□□□□□ -1.53
CAPN3-219ENST00000569136 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
CAPN3-219ENST00000569136 DAND5Q8N907 189 aa5.48□□□□□ -1.53
CAPN3-219ENST00000569136 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
CAPN3-219ENST00000569136 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
CAPN3-219ENST00000569136 SPANXB1Q9NS25 103 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-219ENST00000569136 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
CAPN3-219ENST00000569136 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
CAPN3-219ENST00000569136 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
CAPN3-219ENST00000569136 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
CAPN3-219ENST00000569136 LINC00337Q8N6G1 96 aa5.47□□□□□ -1.53
CAPN3-219ENST00000569136 TRBV10-3A0A0K0K1G6 114 aa5.46□□□□□ -1.54
CAPN3-219ENST00000569136 NCR3O14931 201 aa5.46□□□□□ -1.54
CAPN3-219ENST00000569136 SPRR1AP35321 89 aa5.46□□□□□ -1.54
CAPN3-219ENST00000569136 COL5A1-AS1Q5SY13 56 aa5.46□□□□□ -1.54
CAPN3-219ENST00000569136 S100A7L2Q5SY68 101 aa5.46□□□□□ -1.54
CAPN3-219ENST00000569136 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
CAPN3-219ENST00000569136 IGLV6-57P01721 117 aa5.45□□□□□ -1.54
CAPN3-219ENST00000569136 Q6ZVH6 145 aa5.45□□□□□ -1.54
CAPN3-219ENST00000569136 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
CAPN3-219ENST00000569136 ZNF706Q9Y5V0 76 aaPredicted RBP5.45□□□□□ -1.54
CAPN3-219ENST00000569136 HSBP1L1C9JCN9 74 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 SCGB1D1O95968 90 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 HINT1P49773 126 aaPredicted RBP5.44□□□□□ -1.54
CAPN3-219ENST00000569136 PRLHP81277 87 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 LITAFQ99732 161 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
CAPN3-219ENST00000569136 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
CAPN3-219ENST00000569136 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
CAPN3-219ENST00000569136 IFITM1P13164 125 aa5.43□□□□□ -1.54
CAPN3-219ENST00000569136 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
CAPN3-219ENST00000569136 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
CAPN3-219ENST00000569136 PPDPFQ9H3Y8 114 aa5.43□□□□□ -1.54
CAPN3-219ENST00000569136 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
CAPN3-219ENST00000569136 SOSTDC1Q6X4U4 206 aa5.42□□□□□ -1.54
CAPN3-219ENST00000569136 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
CAPN3-219ENST00000569136 A0A087X002 238 aa5.41□□□□□ -1.54
CAPN3-219ENST00000569136 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
CAPN3-219ENST00000569136 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
CAPN3-219ENST00000569136 TTTY13Q9BZ97 58 aa5.41□□□□□ -1.54
CAPN3-219ENST00000569136 ANAPC11Q9NYG5 84 aa5.41□□□□□ -1.54
CAPN3-219ENST00000569136 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.54
CAPN3-219ENST00000569136 ZNF73O43830 326 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-219ENST00000569136 NPC2P61916 151 aa5.4□□□□□ -1.54
CAPN3-219ENST00000569136 OR13C6PQ8NH95 151 aa5.4□□□□□ -1.54
CAPN3-219ENST00000569136 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
CAPN3-219ENST00000569136 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
CAPN3-219ENST00000569136 Q6ZRX8 168 aa5.39□□□□□ -1.55
CAPN3-219ENST00000569136 PCP2Q8IVA1 136 aa5.39□□□□□ -1.55
CAPN3-219ENST00000569136 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
CAPN3-219ENST00000569136 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
CAPN3-219ENST00000569136 UBE2V1Q13404 147 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 LINC00483Q53H64 154 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
CAPN3-219ENST00000569136 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
CAPN3-219ENST00000569136 TRBV7-6A0A0J9YX20 115 aa5.36□□□□□ -1.55
CAPN3-219ENST00000569136 TSPAN13O95857 204 aa5.36□□□□□ -1.55
CAPN3-219ENST00000569136 GAGE2AQ6NT46 116 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms