RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 LGALS3P17931 250 aaKnown RBP5.94□□□□□ -1.46
CLK3-220ENST00000567992 H0Y9J4 135 aa5.93□□□□□ -1.46
CLK3-220ENST00000567992 DAND5Q8N907 189 aa5.93□□□□□ -1.46
CLK3-220ENST00000567992 HIST1H4GQ99525 98 aa5.93□□□□□ -1.46
CLK3-220ENST00000567992 IGLV1-50A0A075B6I6 118 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 A0A0J9YXY3 114 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 BCE1O60756 84 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 FABP2P12104 132 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
CLK3-220ENST00000567992 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 DIRC1Q969H9 104 aa5.92□□□□□ -1.46
CLK3-220ENST00000567992 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
CLK3-220ENST00000567992 ZNF861PO60384 105 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 PCP4P48539 62 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 RAB37Q96AX2 223 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 LITAFQ99732 161 aa5.91□□□□□ -1.46
CLK3-220ENST00000567992 NHP2Q9NX24 153 aaKnown RBP5.91□□□□□ -1.46
CLK3-220ENST00000567992 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 A6NJY4 79 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.46
CLK3-220ENST00000567992 ADAMTSL4-AS1Q5T5F5 129 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 SOSTDC1Q6X4U4 206 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
CLK3-220ENST00000567992 K7ERJ3 54 aa5.89□□□□□ -1.47
CLK3-220ENST00000567992 M0R378 163 aa5.89□□□□□ -1.47
CLK3-220ENST00000567992 NCR3O14931 201 aa5.89□□□□□ -1.47
CLK3-220ENST00000567992 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
CLK3-220ENST00000567992 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
CLK3-220ENST00000567992 SCGB1D4Q6XE38 83 aa5.88□□□□□ -1.47
CLK3-220ENST00000567992 NAA38Q9BRA0 125 aaKnown RBP5.88□□□□□ -1.47
CLK3-220ENST00000567992 RPL28P46779 137 aaKnown RBP5.87□□□□□ -1.47
CLK3-220ENST00000567992 K7ERU9 68 aa5.86□□□□□ -1.47
CLK3-220ENST00000567992 TIMM17BO60830 172 aa5.86□□□□□ -1.47
CLK3-220ENST00000567992 SPRR1AP35321 89 aa5.86□□□□□ -1.47
CLK3-220ENST00000567992 PRLHP81277 87 aa5.86□□□□□ -1.47
CLK3-220ENST00000567992 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
CLK3-220ENST00000567992 TRBV10-3A0A0K0K1G6 114 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 KRTAP4-16G5E9R7 235 aaPredicted RBP5.85□□□□□ -1.47
CLK3-220ENST00000567992 PRYO14603 147 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 NDUFC2O95298 119 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 UBE2AP49459 152 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 NPC2P61916 151 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
CLK3-220ENST00000567992 F8W1H4 67 aa5.84□□□□□ -1.47
CLK3-220ENST00000567992 LINC00308Q8TCZ7 52 aa5.84□□□□□ -1.47
CLK3-220ENST00000567992 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
CLK3-220ENST00000567992 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
CLK3-220ENST00000567992 A0A087X002 238 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 A0A0B4J2C4 111 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 TSPAN13O95857 204 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 CFC1P0CG37 223 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 LINC00337Q8N6G1 96 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 SPANXDQ9BXN6 97 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 SPANXCQ9NY87 97 aa5.82□□□□□ -1.48
CLK3-220ENST00000567992 PRO1854Q9UHT4 67 aa5.81□□□□□ -1.48
CLK3-220ENST00000567992 PRO0461Q9UI25 63 aa5.81□□□□□ -1.48
CLK3-220ENST00000567992 LRP2P98164 4655 aa5.8□□□□□ -1.48
CLK3-220ENST00000567992 TRBV20-1A0A075B6N2 111 aa5.8□□□□□ -1.48
CLK3-220ENST00000567992 ANAPC11Q9NYG5 84 aa5.8□□□□□ -1.48
CLK3-220ENST00000567992 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
CLK3-220ENST00000567992 A4D1N5 150 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 B5MCH6 92 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 H3BMG7 143 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 RPL13AP40429 203 aaKnown RBP5.79□□□□□ -1.48
CLK3-220ENST00000567992 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 SMCR5Q8TEV8 140 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 VPS25Q9BRG1 176 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 HIGD2AQ9BW72 106 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
CLK3-220ENST00000567992 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
CLK3-220ENST00000567992 FAM229BQ4G0N7 80 aa5.78□□□□□ -1.48
CLK3-220ENST00000567992 S100A7L2Q5SY68 101 aa5.78□□□□□ -1.48
CLK3-220ENST00000567992 ETDCA0A1B0GVM5 59 aa5.77□□□□□ -1.49
CLK3-220ENST00000567992 IFITM1P13164 125 aa5.77□□□□□ -1.49
CLK3-220ENST00000567992 Q6ZRX8 168 aa5.77□□□□□ -1.49
CLK3-220ENST00000567992 SPRR4Q96PI1 79 aa5.77□□□□□ -1.49
CLK3-220ENST00000567992 Q9BRP9 147 aa5.77□□□□□ -1.49
CLK3-220ENST00000567992 J3QR89 54 aa5.76□□□□□ -1.49
CLK3-220ENST00000567992 ZNF73O43830 326 aaPredicted RBP5.76□□□□□ -1.49
CLK3-220ENST00000567992 ERC2-IT1O76042 136 aa5.76□□□□□ -1.49
CLK3-220ENST00000567992 CRYGAP11844 174 aa5.76□□□□□ -1.49
CLK3-220ENST00000567992 TCL1BO95988 128 aa5.75□□□□□ -1.49
CLK3-220ENST00000567992 SCGB1A1P11684 91 aa5.75□□□□□ -1.49
CLK3-220ENST00000567992 PSMB2P49721 201 aa5.75□□□□□ -1.49
CLK3-220ENST00000567992 LPAP08519 4548 aa5.75□□□□□ -1.49
CLK3-220ENST00000567992 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms