RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-212ENST00000560179 DEFB121Q5J5C9 76 aa0.12□□□□□ -2.39
ETFA-212ENST00000560179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.12□□□□□ -2.39
ETFA-212ENST00000560179 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 HIVEP1P15822 2718 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 DEFB135Q30KP9 77 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 BVES-AS1Q5T3Y7 98 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 FAT2Q9NYQ8 4349 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 PPLO60437 1756 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 COL14A1Q05707 1796 aaKnown RBP0.11□□□□□ -2.39
ETFA-212ENST00000560179 REV3LO60673 3130 aa0.11□□□□□ -2.39
ETFA-212ENST00000560179 SETXQ7Z333 2677 aaKnown RBP0.1□□□□□ -2.39
ETFA-212ENST00000560179 BSNQ9UPA5 3926 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 KMT2CQ8NEZ4 4911 aaKnown RBP0.1□□□□□ -2.39
ETFA-212ENST00000560179 LPAP08519 4548 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 NDUFA3O95167 84 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 IFI6P09912 130 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 C3orf79P0CE67 100 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 EP300Q09472 2414 aaPredicted RBP0.1□□□□□ -2.39
ETFA-212ENST00000560179 TNXBP22105 4242 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 FLNAP21333 2647 aaKnown RBP0.1□□□□□ -2.39
ETFA-212ENST00000560179 SUPT6HQ7KZ85 1726 aaKnown RBP0.1□□□□□ -2.39
ETFA-212ENST00000560179 UBR1Q8IWV7 1749 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
ETFA-212ENST00000560179 RGPD2P0DJD1 1756 aa0.09□□□□□ -2.39
ETFA-212ENST00000560179 ABCC1P33527 1531 aa0.09□□□□□ -2.39
ETFA-212ENST00000560179 SMIM13P0DJ93 91 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 LELP1Q5T871 98 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 HMCN2Q8NDA2 5059 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 ARHGAP35Q9NRY4 1499 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.4
ETFA-212ENST00000560179 RGPD5Q99666 1765 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 MYCBP2O75592 4640 aa0.09□□□□□ -2.4
ETFA-212ENST00000560179 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.08□□□□□ -2.44e-12■■■■□ 22.8
ETFA-212ENST00000560179 UBR4Q5T4S7 5183 aa0.08□□□□□ -2.4
ETFA-212ENST00000560179 QSER1Q2KHR3 1735 aa0.08□□□□□ -2.4
ETFA-212ENST00000560179 PRO3102Q9H379 93 aa0.08□□□□□ -2.4
ETFA-212ENST00000560179 BCORQ6W2J9 1755 aa0.08□□□□□ -2.4
ETFA-212ENST00000560179 DCAF1Q9Y4B6 1507 aa0.08□□□□□ -2.4
ETFA-212ENST00000560179 MAP1BP46821 2468 aaKnown RBP0.07□□□□□ -2.4
ETFA-212ENST00000560179 USP32Q8NFA0 1604 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 C18orf32Q8TCD1 76 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 RYR2Q92736 4967 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 CCDC88BA6NC98 1476 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 PREX1Q8TCU6 1659 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 PRKDCP78527 4128 aaKnown RBP0.07□□□□□ -2.4
ETFA-212ENST00000560179 RGPD1P0DJD0 1748 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 TRANK1O15050 2925 aa0.07□□□□□ -2.4
ETFA-212ENST00000560179 TMEM131LA2VDJ0 1609 aa0.06□□□□□ -2.4
ETFA-212ENST00000560179 RIF1Q5UIP0 2472 aaKnown RBP0.06□□□□□ -2.4
ETFA-212ENST00000560179 H0YGG7 62 aa0.06□□□□□ -2.4
ETFA-212ENST00000560179 NREPQ16612 68 aa0.06□□□□□ -2.4
ETFA-212ENST00000560179 STAB2Q8WWQ8 2551 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 KDM5DQ9BY66 1539 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 NDUFA4O00483 81 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 SPRR2BP35325 72 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 WNK1Q9H4A3 2382 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 BPTFQ12830 3046 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 KIAA1109Q2LD37 5005 aa0.05□□□□□ -2.4
ETFA-212ENST00000560179 ANKARQ7Z5J8 1434 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 MAGI3Q5TCQ9 1506 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 HSPG2P98160 4391 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 LCE6AA0A183 80 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 LINC00158P58513 81 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 RNF213Q63HN8 5207 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 APC2O95996 2303 aa0.04□□□□□ -2.4
ETFA-212ENST00000560179 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
ETFA-212ENST00000560179 ALMS1Q8TCU4 4167 aa0.03□□□□□ -2.4
ETFA-212ENST00000560179 CEP170BQ9Y4F5 1589 aaPredicted RBP0.03□□□□□ -2.4
ETFA-212ENST00000560179 DOPEY1Q5JWR5 2465 aa0.03□□□□□ -2.4
ETFA-212ENST00000560179 RYR1P21817 5038 aa0.03□□□□□ -2.4
ETFA-212ENST00000560179 PIK3C2BO00750 1634 aa0.02□□□□□ -2.41
ETFA-212ENST00000560179 NWD1Q149M9 1564 aa0.02□□□□□ -2.41
ETFA-212ENST00000560179 CREBBPQ92793 2442 aa0.02□□□□□ -2.41
ETFA-212ENST00000560179 LTN1O94822 1766 aa0.01□□□□□ -2.41
ETFA-212ENST00000560179 CNOT1A5YKK6 2376 aaKnown RBP0.01□□□□□ -2.41
ETFA-212ENST00000560179 MRPL33O75394 65 aaKnown RBP0.01□□□□□ -2.41
ETFA-212ENST00000560179 SETD2Q9BYW2 2564 aaPredicted RBP0.01□□□□□ -2.41
ETFA-212ENST00000560179 FLNBO75369 2602 aaKnown RBP0.01□□□□□ -2.41
ETFA-212ENST00000560179 ANKRD50Q9ULJ7 1429 aa0.01□□□□□ -2.41
ETFA-212ENST00000560179 DIP2BQ9P265 1576 aa0.01□□□□□ -2.41
ETFA-212ENST00000560179 ACANP16112 2415 aa0.01□□□□□ -2.41
ETFA-212ENST00000560179 LRP2P98164 4655 aa0□□□□□ -2.41
ETFA-212ENST00000560179 POLR1AO95602 1720 aaPredicted RBP0□□□□□ -2.41
ETFA-212ENST00000560179 SCRIBQ14160 1630 aa0□□□□□ -2.41
ETFA-212ENST00000560179 RYR3Q15413 4870 aa0□□□□□ -2.41
ETFA-212ENST00000560179 TEP1Q99973 2627 aaKnown RBP0□□□□□ -2.41
ETFA-212ENST00000560179 HECTD4Q9Y4D8 3996 aa-0□□□□□ -2.41
ETFA-212ENST00000560179 NBEAL2Q6ZNJ1 2754 aa-0□□□□□ -2.41
ETFA-212ENST00000560179 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
ETFA-212ENST00000560179 CICQ96RK0 1608 aaPredicted RBP-0.01□□□□□ -2.41
ETFA-212ENST00000560179 CFAP74Q9C0B2 1584 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 ZANQ9Y493 2812 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 HECTD1Q9ULT8 2610 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 H3BVH4 76 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 KRTAP20-1Q3LI63 56 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 ABCA13Q86UQ4 5058 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 TIAM2Q8IVF5 1701 aa-0.01□□□□□ -2.41
ETFA-212ENST00000560179 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.02□□□□□ -2.41
ETFA-212ENST00000560179 AKAP13Q12802 2813 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms