RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 DIP2CQ9Y2E4 1556 aa-1.72□□□□□ -2.69
CASC4-210ENST00000559550 VPS13CQ709C8 3753 aa-1.73□□□□□ -2.69
CASC4-210ENST00000559550 A0A087WVE0 104 aa-1.73□□□□□ -2.69
CASC4-210ENST00000559550 I3L3M4 83 aa-1.73□□□□□ -2.69
CASC4-210ENST00000559550 PRO1854Q9UHT4 67 aa-1.73□□□□□ -2.69
CASC4-210ENST00000559550 CICQ96RK0 1608 aaPredicted RBP-1.73□□□□□ -2.69
CASC4-210ENST00000559550 UNC13AQ9UPW8 1703 aa-1.74□□□□□ -2.69
CASC4-210ENST00000559550 ATP5EP56381 51 aaPredicted RBP-1.74□□□□□ -2.69
CASC4-210ENST00000559550 NUP188Q5SRE5 1749 aa-1.74□□□□□ -2.69
CASC4-210ENST00000559550 CCDC141Q6ZP82 1450 aa-1.75□□□□□ -2.69
CASC4-210ENST00000559550 MRC2Q9UBG0 1479 aa-1.75□□□□□ -2.69
CASC4-210ENST00000559550 FAM24AA6NFZ4 105 aa-1.75□□□□□ -2.69
CASC4-210ENST00000559550 C12orf57Q99622 126 aa-1.75□□□□□ -2.69
CASC4-210ENST00000559550 MUC3AQ02505 3323 aa-1.75□□□□□ -2.69
CASC4-210ENST00000559550 SCN11AQ9UI33 1791 aa-1.76□□□□□ -2.69
CASC4-210ENST00000559550 SAA2P0DJI9 122 aaPredicted RBP-1.76□□□□□ -2.69
CASC4-210ENST00000559550 TSC22D3Q99576 134 aa-1.76□□□□□ -2.69
CASC4-210ENST00000559550 DNAH14Q0VDD8 3507 aa-1.77□□□□□ -2.69
CASC4-210ENST00000559550 CLPSL2Q6UWE3 100 aa-1.77□□□□□ -2.69
CASC4-210ENST00000559550 C6orf201Q7Z4U5 140 aa-1.77□□□□□ -2.69
CASC4-210ENST00000559550 FAM107BQ9H098 131 aa-1.77□□□□□ -2.69
CASC4-210ENST00000559550 TOP2BQ02880 1626 aa-1.77□□□□□ -2.69
CASC4-210ENST00000559550 PCNTO95613 3336 aa-1.78□□□□□ -2.69
CASC4-210ENST00000559550 NAP1L6A6NFF2 107 aa-1.78□□□□□ -2.69
CASC4-210ENST00000559550 SNAPC5O75971 98 aa-1.78□□□□□ -2.69
CASC4-210ENST00000559550 ROCK2O75116 1388 aaKnown RBP-1.78□□□□□ -2.69
CASC4-210ENST00000559550 MAGI2Q86UL8 1455 aa-1.78□□□□□ -2.69
CASC4-210ENST00000559550 CFAP47Q6ZTR5 3102 aa-1.78□□□□□ -2.69
CASC4-210ENST00000559550 CUL7Q14999 1698 aa-1.79□□□□□ -2.7
CASC4-210ENST00000559550 ALKQ9UM73 1620 aa-1.79□□□□□ -2.7
CASC4-210ENST00000559550 HSD52Q0P140 79 aa-1.8□□□□□ -2.7
CASC4-210ENST00000559550 WFDC13Q8IUB5 93 aa-1.8□□□□□ -2.7
CASC4-210ENST00000559550 C1orf54Q8WWF1 131 aa-1.8□□□□□ -2.7
CASC4-210ENST00000559550 MRPL34Q9BQ48 92 aaKnown RBP-1.8□□□□□ -2.7
CASC4-210ENST00000559550 MKI67P46013 3256 aaKnown RBP-1.81□□□□□ -2.7
CASC4-210ENST00000559550 EDC4Q6P2E9 1401 aaKnown RBP-1.81□□□□□ -2.7
CASC4-210ENST00000559550 SNCAP37840 140 aa-1.81□□□□□ -2.7
CASC4-210ENST00000559550 SZT2Q5T011 3432 aa-1.81□□□□□ -2.7
CASC4-210ENST00000559550 ANKRD36A6QL64 1941 aa-1.81□□□□□ -2.7
CASC4-210ENST00000559550 FYCO1Q9BQS8 1478 aa-1.82□□□□□ -2.7
CASC4-210ENST00000559550 CRYM-AS1A6NIL9 109 aa-1.82□□□□□ -2.7
CASC4-210ENST00000559550 PRO3102Q9H379 93 aa-1.82□□□□□ -2.7
CASC4-210ENST00000559550 MYOM2P54296 1465 aa-1.82□□□□□ -2.7
CASC4-210ENST00000559550 CEP250Q9BV73 2442 aa-1.82□□□□□ -2.7
CASC4-210ENST00000559550 C7orf77A4D0Y5 90 aa-1.83□□□□□ -2.7
CASC4-210ENST00000559550 PRLHP81277 87 aa-1.83□□□□□ -2.7
CASC4-210ENST00000559550 HEPN1Q6WQI6 88 aa-1.83□□□□□ -2.7
CASC4-210ENST00000559550 S100A12P80511 92 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 DEFB107AQ8IZN7 70 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 SVBPQ8N300 66 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 IER3IP1Q9Y5U9 82 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 C4AP0C0L4 1744 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 C4BP0C0L5 1744 aa-1.84□□□□□ -2.7
CASC4-210ENST00000559550 TIAM2Q8IVF5 1701 aa-1.85□□□□□ -2.71
CASC4-210ENST00000559550 PDCD11Q14690 1871 aaKnown RBP-1.85□□□□□ -2.71
CASC4-210ENST00000559550 A0A0G2JND7 137 aa-1.85□□□□□ -2.71
CASC4-210ENST00000559550 H3BQF6 201 aa-1.85□□□□□ -2.71
CASC4-210ENST00000559550 RGPD2P0DJD1 1756 aa-1.85□□□□□ -2.71
CASC4-210ENST00000559550 H0Y9P7 68 aa-1.86□□□□□ -2.71
CASC4-210ENST00000559550 RPS29P62273 56 aaKnown RBP-1.86□□□□□ -2.71
CASC4-210ENST00000559550 NCOA3Q9Y6Q9 1424 aa-1.86□□□□□ -2.71
CASC4-210ENST00000559550 ARHGAP5Q13017 1502 aa-1.86□□□□□ -2.71
CASC4-210ENST00000559550 TRAV30A0A087WSZ9 112 aa-1.87□□□□□ -2.71
CASC4-210ENST00000559550 CCL22O00626 93 aa-1.87□□□□□ -2.71
CASC4-210ENST00000559550 CGREF1Q99674 301 aa-1.87□□□□□ -2.71
CASC4-210ENST00000559550 CDKN2A-AS1Q9UH64 79 aa-1.87□□□□□ -2.71
CASC4-210ENST00000559550 ANKRD36CQ5JPF3 1778 aa-1.87□□□□□ -2.71
CASC4-210ENST00000559550 LRRC37AA6NMS7 1700 aa-1.88□□□□□ -2.71
CASC4-210ENST00000559550 LOC400499M0QZD8 3231 aa-1.88□□□□□ -2.71
CASC4-210ENST00000559550 HMGN1P05114 100 aa-1.88□□□□□ -2.71
CASC4-210ENST00000559550 TMEM262E9PQX1 116 aa-1.89□□□□□ -2.71
CASC4-210ENST00000559550 GNGT1P63211 74 aa-1.89□□□□□ -2.71
CASC4-210ENST00000559550 VAMP8Q9BV40 100 aa-1.89□□□□□ -2.71
CASC4-210ENST00000559550 TARBP1Q13395 1621 aaKnown RBP-1.9□□□□□ -2.71
CASC4-210ENST00000559550 NALCNQ8IZF0 1738 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 KIAA1551Q9HCM1 1747 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 hADV29S1A0JD25 119 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 H3BQ15 152 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 ARMS2P0C7Q2 107 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 PPP3R1P63098 170 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 ZNF831Q5JPB2 1677 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 VCANP13611 3396 aa-1.9□□□□□ -2.71
CASC4-210ENST00000559550 PRDM15P57071 1507 aaPredicted RBP-1.91□□□□□ -2.71
CASC4-210ENST00000559550 USP34Q70CQ2 3546 aa-1.91□□□□□ -2.72
CASC4-210ENST00000559550 H7BZZ5 65 aa-1.91□□□□□ -2.72
CASC4-210ENST00000559550 TNP1P09430 55 aa-1.91□□□□□ -2.72
CASC4-210ENST00000559550 KRTDAPP60985 99 aa-1.91□□□□□ -2.72
CASC4-210ENST00000559550 HIGD1BQ9P298 99 aa-1.91□□□□□ -2.72
CASC4-210ENST00000559550 SPTY2D1-AS1A0A0U1RR47 76 aa-1.92□□□□□ -2.72
CASC4-210ENST00000559550 GNG4P50150 75 aa-1.92□□□□□ -2.72
CASC4-210ENST00000559550 RPL13AP3Q6NVV1 102 aa-1.92□□□□□ -2.72
CASC4-210ENST00000559550 CC2D2AQ9P2K1 1620 aa-1.92□□□□□ -2.72
CASC4-210ENST00000559550 DEFB106AQ8N104 65 aa-1.93□□□□□ -2.72
CASC4-210ENST00000559550 CLIP1P30622 1438 aa-1.93□□□□□ -2.72
CASC4-210ENST00000559550 NRKQ7Z2Y5 1582 aa-1.93□□□□□ -2.72
CASC4-210ENST00000559550 MAPKBP1O60336 1514 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 CUX1P39880 1505 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 TRBV7-7A0A0K0K1E9 115 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 A8MTW9 85 aa-1.94□□□□□ -2.72
CASC4-210ENST00000559550 CORTO00230 105 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms