RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 RABAC1Q9UI14 185 aa2.27□□□□□ -2.05
LRRC28-205ENST00000558248 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 SMIM31A0A1B0GVY4 71 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 TMEM30CPA0ZSE6 113 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 K7EP34 96 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 FXYD6P3P58550 94 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 UBE2DNLQ8IWF7 75 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 PMCHL2Q9BQD1 86 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 NACAE9PAV3 2078 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 DNAH5Q8TE73 4624 aa2.26□□□□□ -2.05
LRRC28-205ENST00000558248 DEFB131BA0A096LNP1 70 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 hADV29S1A0JD25 119 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 NAP1L6A6NFF2 107 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 ATOX1O00244 68 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 CYB5AP00167 134 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 IGLV6-57P01721 117 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 MOBPQ13875 183 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 MPV17LQ2QL34 196 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 LYPD5Q6UWN5 251 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 SPTSSBQ8NFR3 76 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 AMELYQ99218 206 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 FAM103A1Q9BTL3 118 aaKnown RBP2.25□□□□□ -2.05
LRRC28-205ENST00000558248 TIMM21Q9BVV7 248 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 TTTY10Q9BZA0 68 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 ORMDL1Q9P0S3 153 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 C22orf24Q9Y442 160 aa2.25□□□□□ -2.05
LRRC28-205ENST00000558248 TRAV13-2A0A0B4J235 113 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 TRBV10-3A0A0K0K1G6 114 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 HCG22E2RYF7 251 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 FAUP35544 74 aaKnown RBP2.24□□□□□ -2.05
LRRC28-205ENST00000558248 KRTAP10-1P60331 282 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 HAMPP81172 84 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 DEFA5Q01523 94 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 S100A16Q96FQ6 103 aaKnown RBP2.24□□□□□ -2.05
LRRC28-205ENST00000558248 CMC2Q9NRP2 79 aa2.24□□□□□ -2.05
LRRC28-205ENST00000558248 A0A0G2JQZ4 141 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 TRBV7-7A0A0K0K1E9 115 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 NBDYA0A0U1RRE5 68 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 NDUFC1O43677 76 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 SIX6O95475 246 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 RNASE2P10153 161 aaKnown RBP2.23□□□□□ -2.05
LRRC28-205ENST00000558248 SEC11AP67812 179 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 DEFB104AQ8WTQ1 72 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 LINC00052Q96N35 136 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 CYTL1Q9NRR1 136 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 UQCR10Q9UDW1 63 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
LRRC28-205ENST00000558248 FAT1Q14517 4588 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 A0A0J9YY99 117 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 TRBV10-1A0A0K0K1A3 114 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 LRCOL1A6NCL2 159 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 H3BRM9 83 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 NDUFA3O95167 84 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 SFT2D2O95562 160 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 NMBP08949 121 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 SNRPGP62308 76 aaKnown RBP2.22□□□□□ -2.05
LRRC28-205ENST00000558248 TDRG1Q3Y452 100 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 FAM74A1Q5RGS3 127 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 LINC01590Q5TEZ4 76 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 LINC00299Q6ZSB3 139 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
LRRC28-205ENST00000558248 LINC00474Q9P2X8 69 aa2.22□□□□□ -2.05
LRRC28-205ENST00000558248 H3BUA1 57 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 IGLV3-1P01715 115 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 LELP1Q5T871 98 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 ZNF818PQ6ZRF7 136 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 SERP2Q8N6R1 65 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 DMAC1Q96GE9 116 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 USMG5Q96IX5 58 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 TRGV9Q99603 122 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 C20orf78Q9BR46 151 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 R4GMQ9 66 aa2.21□□□□□ -2.06
LRRC28-205ENST00000558248 LRP2P98164 4655 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 IGLC7A0M8Q6 106 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 IGHV3-30P01768 117 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 TRAPPC2P0DI81 140 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 TRAPPC2BP0DI82 140 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 IGHV3-30-5P0DP03 117 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 ZNF137PP52743 207 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 FXYD3Q14802 87 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 PLGLAQ15195 96 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 ADIRFQ15847 76 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 KRTAP13-2Q52LG2 175 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 PRR9Q5T870 116 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 CSAG1Q6PB30 78 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 ALKAL2Q6UX46 152 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
LRRC28-205ENST00000558248 FAM213BQ8TBF2 198 aa2.2□□□□□ -2.06
LRRC28-205ENST00000558248 TRAV23DV6A0A075B6W5 121 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 A0A087WXM4 84 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 TRBV7-1A0A0A6YYK4 115 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 TRAV12-3A0A0B4J271 114 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 IGKV2-24A0A0C4DH68 120 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 J3QRE1 110 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 NUPR1O60356 82 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 PRH1P02810 166 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms