RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 CFC1P0CG37 223 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 FABP2P12104 132 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 CKS1BP61024 79 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 GTF2H5Q6ZYL4 71 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 PRO1854Q9UHT4 67 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 PKIGQ9Y2B9 76 aa4.71□□□□□ -1.66
SPG11-205ENST00000558080 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 PRR3P79522 188 aaKnown RBP4.7□□□□□ -1.66
SPG11-205ENST00000558080 SPAG11BQ08648 103 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 UBE2V1Q13404 147 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 KIAA0087Q14695 138 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 ERG28Q9UKR5 140 aa4.7□□□□□ -1.66
SPG11-205ENST00000558080 A0A0U1RRA0 63 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 A0A1W2PNN7 141 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 GAGE10A6NGK3 116 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 K7EP34 96 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 TSPAN13O95857 204 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 LINC00158P58513 81 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 NPC2P61916 151 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 DAND5Q8N907 189 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
SPG11-205ENST00000558080 SPCS1Q9Y6A9 102 aa4.69□□□□□ -1.66
SPG11-205ENST00000558080 F8WDY8 70 aa4.68□□□□□ -1.66
SPG11-205ENST00000558080 RPL18AQ02543 176 aaKnown RBP4.68□□□□□ -1.66
SPG11-205ENST00000558080 COX17Q14061 63 aa4.68□□□□□ -1.66
SPG11-205ENST00000558080 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
SPG11-205ENST00000558080 PFN2P35080 140 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 Q1RN00 199 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
SPG11-205ENST00000558080 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 UNQ6190/PRO20217Q6UXQ8 127 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 Q6ZRP5 223 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
SPG11-205ENST00000558080 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
SPG11-205ENST00000558080 PSMB2P49721 201 aa4.66□□□□□ -1.66
SPG11-205ENST00000558080 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
SPG11-205ENST00000558080 SND1-IT1Q9HBX3 110 aa4.66□□□□□ -1.66
SPG11-205ENST00000558080 TRBV20-1A0A075B6N2 111 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 H7C2G1 150 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 RPL13AP40429 203 aaKnown RBP4.65□□□□□ -1.67
SPG11-205ENST00000558080 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 PHF5AQ7RTV0 110 aaKnown RBP4.65□□□□□ -1.67
SPG11-205ENST00000558080 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
SPG11-205ENST00000558080 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 C6orf48Q9UBA6 75 aa4.65□□□□□ -1.67
SPG11-205ENST00000558080 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 COX6CP09669 75 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 SCGB1C2P0DMR2 95 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 GAGE2EQ4V326 116 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 REG3GQ6UW15 175 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 GAGE2DQ9UEU5 116 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
SPG11-205ENST00000558080 NDUFC2O95298 119 aa4.63□□□□□ -1.67
SPG11-205ENST00000558080 C1orf137Q5JT78 98 aa4.63□□□□□ -1.67
SPG11-205ENST00000558080 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
SPG11-205ENST00000558080 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
SPG11-205ENST00000558080 TRIAP1O43715 76 aa4.62□□□□□ -1.67
SPG11-205ENST00000558080 TLX1NBP0CAT3 122 aa4.62□□□□□ -1.67
SPG11-205ENST00000558080 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
SPG11-205ENST00000558080 ATXN8Q156A1 80 aa4.62□□□□□ -1.67
SPG11-205ENST00000558080 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
SPG11-205ENST00000558080 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
SPG11-205ENST00000558080 H3BMG7 143 aa4.61□□□□□ -1.67
SPG11-205ENST00000558080 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
SPG11-205ENST00000558080 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
SPG11-205ENST00000558080 TNXBP22105 4242 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 F8W1H4 67 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 TCL1BO95988 128 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
SPG11-205ENST00000558080 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 LINC00337Q8N6G1 96 aa4.6□□□□□ -1.67
SPG11-205ENST00000558080 M0QXV9 152 aa4.59□□□□□ -1.67
SPG11-205ENST00000558080 IGLV7-43P04211 117 aa4.59□□□□□ -1.67
SPG11-205ENST00000558080 UBE2BP63146 152 aa4.59□□□□□ -1.67
SPG11-205ENST00000558080 C9orf129Q5T035 196 aaKnown RBP4.59□□□□□ -1.67
SPG11-205ENST00000558080 OR13C6PQ8NH95 151 aa4.59□□□□□ -1.67
SPG11-205ENST00000558080 TRBV10-2A0A0K0K1G8 114 aa4.58□□□□□ -1.68
SPG11-205ENST00000558080 LST1O00453 97 aa4.58□□□□□ -1.68
SPG11-205ENST00000558080 DIRC1Q969H9 104 aa4.58□□□□□ -1.68
SPG11-205ENST00000558080 TMEM126AQ9H061 195 aa4.58□□□□□ -1.68
SPG11-205ENST00000558080 PRO0461Q9UI25 63 aa4.58□□□□□ -1.68
SPG11-205ENST00000558080 H0YGX0 51 aa4.57□□□□□ -1.68
SPG11-205ENST00000558080 NCR3O14931 201 aa4.57□□□□□ -1.68
SPG11-205ENST00000558080 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SPG11-205ENST00000558080 S100A7L2Q5SY68 101 aa4.57□□□□□ -1.68
SPG11-205ENST00000558080 SMIM11BQ8TCY0 68 aa4.57□□□□□ -1.68
SPG11-205ENST00000558080 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
SPG11-205ENST00000558080 C9JAW5 83 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 H0Y9J4 135 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 TRACP01848 142 aa4.56□□□□□ -1.68
SPG11-205ENST00000558080 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms