RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 Q6ZRX8 168 aa5.06□□□□□ -1.6
CHD8-209ENST00000555935 C7orf33Q8WU49 177 aa5.06□□□□□ -1.6
CHD8-209ENST00000555935 CFAP46Q8IYW2 2715 aa5.06□□□□□ -1.6
CHD8-209ENST00000555935 UTP20O75691 2785 aaKnown RBP5.06□□□□□ -1.6
CHD8-209ENST00000555935 PKD1L2Q7Z442 2459 aa5.06□□□□□ -1.6
CHD8-209ENST00000555935 LRCOL1A6NCL2 159 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 LRRK2Q5S007 2527 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 PTPN13Q12923 2485 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 H3BNG1 76 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 K7EQZ3 153 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 SYCNQ0VAF6 134 aa5.05□□□□□ -1.6
CHD8-209ENST00000555935 PSCAO43653 123 aa5.04□□□□□ -1.6
CHD8-209ENST00000555935 WFDC10BQ8IUB3 73 aa5.04□□□□□ -1.6
CHD8-209ENST00000555935 SPTBN4Q9H254 2564 aa5.04□□□□□ -1.6
CHD8-209ENST00000555935 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
CHD8-209ENST00000555935 PSPHP1O15172 72 aa5.04□□□□□ -1.6
CHD8-209ENST00000555935 SPRR1AP35321 89 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 SERTAD4-AS1Q5TG53 156 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 Q9BRP9 147 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 NIPBLQ6KC79 2804 aaeCLIP5.03□□□□□ -1.6
CHD8-209ENST00000555935 ZFYVE26Q68DK2 2539 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 IGLV5-37A0A075B6J1 123 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 TLX1NBP0CAT3 122 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 MP68P56378 58 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 KRTAP10-3P60369 221 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 KRTAP1-1Q07627 177 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 ST20-AS1Q8NBB2 130 aa5.03□□□□□ -1.6
CHD8-209ENST00000555935 SONP18583 2426 aaKnown RBP5.02□□□□□ -1.61
CHD8-209ENST00000555935 FAM208BQ5VWN6 2430 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 CUBNO60494 3623 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 MYO18BQ8IUG5 2567 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 SPANXA2-OT1Q8N9U9 137 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 B9D2Q9BPU9 175 aa5.01□□□□□ -1.61
CHD8-209ENST00000555935 H3BPC8 53 aa5□□□□□ -1.61
CHD8-209ENST00000555935 KMT2BQ9UMN6 2715 aaPredicted RBP5□□□□□ -1.61
CHD8-209ENST00000555935 A8MUN3 132 aa5□□□□□ -1.61
CHD8-209ENST00000555935 PRR4Q16378 134 aa5□□□□□ -1.61
CHD8-209ENST00000555935 GCN1Q92616 2671 aaKnown RBP5□□□□□ -1.61
CHD8-209ENST00000555935 NF1P21359 2839 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 IGKV2D-24A0A075B6R9 120 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 LINC01556Q5JQF7 62 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 APCP25054 2843 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 UBE2BP63146 152 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
CHD8-209ENST00000555935 SETD2Q9BYW2 2564 aaPredicted RBP4.99□□□□□ -1.61
CHD8-209ENST00000555935 UBE2AP49459 152 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 Q5VV11 94 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 ABCA12Q86UK0 2595 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 IGSF10Q6WRI0 2623 aa4.98□□□□□ -1.61
CHD8-209ENST00000555935 CD164Q04900 197 aa4.97□□□□□ -1.61
CHD8-209ENST00000555935 MRPL55Q7Z7F7 128 aaKnown RBP4.97□□□□□ -1.61
CHD8-209ENST00000555935 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
CHD8-209ENST00000555935 WFDC13Q8IUB5 93 aa4.96□□□□□ -1.61
CHD8-209ENST00000555935 KRTAP29-1A8MX34 341 aaPredicted RBP4.96□□□□□ -1.62
CHD8-209ENST00000555935 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
CHD8-209ENST00000555935 CENPEQ02224 2701 aa4.96□□□□□ -1.62
CHD8-209ENST00000555935 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
CHD8-209ENST00000555935 IGFL1Q6UW32 110 aa4.95□□□□□ -1.62
CHD8-209ENST00000555935 FAM168BA1KXE4 195 aa4.95□□□□□ -1.62
CHD8-209ENST00000555935 H0Y9P7 68 aa4.95□□□□□ -1.62
CHD8-209ENST00000555935 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
CHD8-209ENST00000555935 LINC00588Q9Y4M8 146 aa4.94□□□□□ -1.62
CHD8-209ENST00000555935 HIVEP2P31629 2446 aa4.94□□□□□ -1.62
CHD8-209ENST00000555935 REG3GQ6UW15 175 aa4.94□□□□□ -1.62
CHD8-209ENST00000555935 CCDC168Q8NDH2 2452 aa4.94□□□□□ -1.62
CHD8-209ENST00000555935 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 ZNF469Q96JG9 3925 aaPredicted RBP4.93□□□□□ -1.62
CHD8-209ENST00000555935 A0A087WSZ3 146 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 ZNF462Q96JM2 2506 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 UBR5O95071 2799 aaPredicted RBP4.93□□□□□ -1.62
CHD8-209ENST00000555935 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
CHD8-209ENST00000555935 PRB2P02812 416 aaPredicted RBP4.93□□□□□ -1.62
CHD8-209ENST00000555935 Q75L30 129 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
CHD8-209ENST00000555935 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
CHD8-209ENST00000555935 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
CHD8-209ENST00000555935 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
CHD8-209ENST00000555935 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
CHD8-209ENST00000555935 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
CHD8-209ENST00000555935 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
CHD8-209ENST00000555935 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.62
CHD8-209ENST00000555935 A8MU10 97 aa4.9□□□□□ -1.62
CHD8-209ENST00000555935 A8MWP4 228 aa4.9□□□□□ -1.62
CHD8-209ENST00000555935 USP24Q9UPU5 2620 aa4.9□□□□□ -1.63
CHD8-209ENST00000555935 RPL37AP61513 92 aaKnown RBP4.9□□□□□ -1.63
CHD8-209ENST00000555935 CNBPP62633 177 aaKnown RBP4.9□□□□□ -1.63
CHD8-209ENST00000555935 A0A0G2JQZ4 141 aa4.89□□□□□ -1.63
CHD8-209ENST00000555935 A0A1W2PNN7 141 aa4.89□□□□□ -1.63
CHD8-209ENST00000555935 NDUFS5O43920 106 aa4.89□□□□□ -1.63
CHD8-209ENST00000555935 MTORP42345 2549 aa4.89□□□□□ -1.63
CHD8-209ENST00000555935 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms