RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 CCDC88BA6NC98 1476 aa0.3□□□□□ -2.36
PPP4R3A-210ENST00000555718 KANTRA0A1W2PQU2 76 aa0.3□□□□□ -2.36
PPP4R3A-210ENST00000555718 DEFB121Q5J5C9 76 aa0.3□□□□□ -2.36
PPP4R3A-210ENST00000555718 S100A13Q99584 98 aa0.3□□□□□ -2.36
PPP4R3A-210ENST00000555718 PTPN13Q12923 2485 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 COX8AP10176 69 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 COX7BP24311 80 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 BVES-AS1Q5T3Y7 98 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 U3KQA8 63 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 WIZO95785 1651 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 ITSN1Q15811 1721 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 RICTORQ6R327 1708 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 KMT2DO14686 5537 aa0.29□□□□□ -2.36
PPP4R3A-210ENST00000555718 CFDP00746 253 aaPredicted RBP0.28□□□□□ -2.36
PPP4R3A-210ENST00000555718 MRPL34Q9BQ48 92 aaKnown RBP0.28□□□□□ -2.36
PPP4R3A-210ENST00000555718 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
PPP4R3A-210ENST00000555718 ADAMTS12P58397 1594 aa0.28□□□□□ -2.37
PPP4R3A-210ENST00000555718 ALMS1Q8TCU4 4167 aa0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 TRAV21A0A0B4J279 112 aa0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 CPSF4LA6NMK7 179 aaKnown RBP0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 ADIRFQ15847 76 aa0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 LPAP08519 4548 aa0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 DDX60LQ5H9U9 1706 aaKnown RBP0.27□□□□□ -2.37
PPP4R3A-210ENST00000555718 SPTY2D1-AS1A0A0U1RR47 76 aa0.26□□□□□ -2.37
PPP4R3A-210ENST00000555718 RNF17Q9BXT8 1623 aaKnown RBP0.26□□□□□ -2.37
PPP4R3A-210ENST00000555718 TRANK1O15050 2925 aa0.25□□□□□ -2.37
PPP4R3A-210ENST00000555718 LCE6AA0A183 80 aa0.25□□□□□ -2.37
PPP4R3A-210ENST00000555718 H3BUT2 72 aa0.25□□□□□ -2.37
PPP4R3A-210ENST00000555718 I3L3M4 83 aa0.25□□□□□ -2.37
PPP4R3A-210ENST00000555718 TJP1Q07157 1748 aa0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 CLIP1P30622 1438 aa0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 ANKARQ7Z5J8 1434 aa0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 PRM1P04553 51 aa0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 LELP1Q5T871 98 aa0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
PPP4R3A-210ENST00000555718 KLK9Q2XQG4 91 aa0.23□□□□□ -2.37
PPP4R3A-210ENST00000555718 H1FX-AS1Q4G0G2 97 aa0.23□□□□□ -2.37
PPP4R3A-210ENST00000555718 GAFA1Q96PS6 74 aa0.23□□□□□ -2.37
PPP4R3A-210ENST00000555718 HECTD4Q9Y4D8 3996 aa0.23□□□□□ -2.37
PPP4R3A-210ENST00000555718 EP300Q09472 2414 aaPredicted RBP0.23□□□□□ -2.37
PPP4R3A-210ENST00000555718 KNL1Q8NG31 2342 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 CHD8Q9HCK8 2581 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 NRAPQ86VF7 1730 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 ATP5EP2Q5VTU8 51 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 SETXQ7Z333 2677 aaKnown RBP0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 FLNCQ14315 2725 aa0.22□□□□□ -2.37
PPP4R3A-210ENST00000555718 NHSQ6T4R5 1651 aa0.21□□□□□ -2.38
PPP4R3A-210ENST00000555718 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 PLXNC1O60486 1568 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 UGGT2Q9NYU1 1516 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 CCL22O00626 93 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 NDUFB1O75438 58 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 HMGA1P17096 107 aaKnown RBP0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 APLNQ9ULZ1 77 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
PPP4R3A-210ENST00000555718 IFI6P09912 130 aa0.19□□□□□ -2.38
PPP4R3A-210ENST00000555718 WFDC9Q8NEX5 89 aa0.19□□□□□ -2.38
PPP4R3A-210ENST00000555718 C18orf32Q8TCD1 76 aa0.19□□□□□ -2.38
PPP4R3A-210ENST00000555718 DNMBPQ6XZF7 1577 aa0.19□□□□□ -2.38
PPP4R3A-210ENST00000555718 ZC3H13Q5T200 1668 aaKnown RBP0.18□□□□□ -2.38
PPP4R3A-210ENST00000555718 SPRR2DP22532 72 aa0.18□□□□□ -2.38
PPP4R3A-210ENST00000555718 CDC42BPGQ6DT37 1551 aa0.18□□□□□ -2.38
PPP4R3A-210ENST00000555718 BPTFQ12830 3046 aa0.18□□□□□ -2.38
PPP4R3A-210ENST00000555718 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
PPP4R3A-210ENST00000555718 ABCA9Q8IUA7 1624 aa0.17□□□□□ -2.38
PPP4R3A-210ENST00000555718 HSPG2P98160 4391 aa0.17□□□□□ -2.38
PPP4R3A-210ENST00000555718 AKAP13Q12802 2813 aa0.17□□□□□ -2.38
PPP4R3A-210ENST00000555718 SPINK4O60575 86 aa0.16□□□□□ -2.38
PPP4R3A-210ENST00000555718 FXYD6Q9H0Q3 95 aa0.16□□□□□ -2.38
PPP4R3A-210ENST00000555718 WNK1Q9H4A3 2382 aa0.16□□□□□ -2.38
PPP4R3A-210ENST00000555718 ANKRD50Q9ULJ7 1429 aa0.15□□□□□ -2.39
PPP4R3A-210ENST00000555718 COX6B2Q6YFQ2 88 aa0.15□□□□□ -2.39
PPP4R3A-210ENST00000555718 MAP1BP46821 2468 aaKnown RBP0.15□□□□□ -2.39
PPP4R3A-210ENST00000555718 NSD1Q96L73 2696 aaPredicted RBP0.15□□□□□ -2.39
PPP4R3A-210ENST00000555718 LMTK2Q8IWU2 1503 aa0.14□□□□□ -2.39
PPP4R3A-210ENST00000555718 RPL38P63173 70 aaKnown RBP0.14□□□□□ -2.39
PPP4R3A-210ENST00000555718 UMAD1C9J7I0 102 aa0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 SMIM13P0DJ93 91 aa0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 IFI27P40305 119 aaPredicted RBP0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 NREPQ16612 68 aa0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 TENM2Q9NT68 2774 aa0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 COL6A3P12111 3177 aa0.13□□□□□ -2.39
PPP4R3A-210ENST00000555718 DEPDC5O75140 1603 aa0.12□□□□□ -2.39
PPP4R3A-210ENST00000555718 FLNAP21333 2647 aaKnown RBP0.12□□□□□ -2.39
PPP4R3A-210ENST00000555718 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
PPP4R3A-210ENST00000555718 THOC2Q8NI27 1593 aaKnown RBP0.11□□□□□ -2.39
PPP4R3A-210ENST00000555718 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
PPP4R3A-210ENST00000555718 DSPP15924 2871 aaKnown RBP0.11□□□□□ -2.39
PPP4R3A-210ENST00000555718 CDKN2A-AS1Q9UH64 79 aa0.11□□□□□ -2.39
PPP4R3A-210ENST00000555718 MROH1Q8NDA8 1641 aa0.09□□□□□ -2.39
PPP4R3A-210ENST00000555718 LYSTQ99698 3801 aa0.09□□□□□ -2.39
PPP4R3A-210ENST00000555718 ASXL1Q8IXJ9 1541 aa0.09□□□□□ -2.39
PPP4R3A-210ENST00000555718 C3P01024 1663 aa0.09□□□□□ -2.39
PPP4R3A-210ENST00000555718 NDUFA3O95167 84 aa0.09□□□□□ -2.4
PPP4R3A-210ENST00000555718 WFDC13Q8IUB5 93 aa0.09□□□□□ -2.4
PPP4R3A-210ENST00000555718 ACANP16112 2415 aa0.09□□□□□ -2.4
PPP4R3A-210ENST00000555718 APC2O95996 2303 aa0.09□□□□□ -2.4
PPP4R3A-210ENST00000555718 MADDQ8WXG6 1647 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms