RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 TMEM131LA2VDJ0 1609 aa-0.05□□□□□ -2.42
KTN1-219ENST00000555164 FASNP49327 2511 aaKnown RBP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 DNAH3Q8TD57 4116 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 VPS13BQ7Z7G8 4022 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 PRRC2CQ9Y520 2896 aaKnown RBP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 MYO18BQ8IUG5 2567 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 CUBNO60494 3623 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 TNRC18O15417 2968 aaPredicted RBP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 KRTAP19-7Q3SYF9 63 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 ACACAQ13085 2346 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 PDE4DIPQ5VU43 2346 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 HERC2O95714 4834 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 PKD1L2Q7Z442 2459 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 ANKRD11Q6UB99 2663 aaPredicted RBP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 LAMA1P25391 3075 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 HECTD1Q9ULT8 2610 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 NIPBLQ6KC79 2804 aaeCLIP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 KALRNO60229 2985 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 FAM186AA6NE01 2351 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 RGPD8O14715 1765 aaPredicted RBP-0.06□□□□□ -2.42
KTN1-219ENST00000555164 RGPD5Q99666 1765 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 SMARCA2P51531 1590 aa-0.06□□□□□ -2.42
KTN1-219ENST00000555164 REV3LO60673 3130 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 NBEAQ8NFP9 2946 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 LRRK2Q5S007 2527 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 HERC1Q15751 4861 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 KMT2CQ8NEZ4 4911 aaKnown RBP-0.07□□□□□ -2.42
KTN1-219ENST00000555164 I3L3M4 83 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 M0R2T5 61 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 PEA15Q15121 130 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 NMSQ5H8A3 153 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 DOPEY1Q5JWR5 2465 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 RIF1Q5UIP0 2472 aaKnown RBP-0.07□□□□□ -2.42
KTN1-219ENST00000555164 RELNP78509 3460 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 TEX15Q9BXT5 2789 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 UBR4Q5T4S7 5183 aa-0.07□□□□□ -2.42
KTN1-219ENST00000555164 FRYQ5TBA9 3013 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 DNAH6Q9C0G6 4158 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 CEP290O15078 2479 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 LRP1BQ9NZR2 4599 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 A0A0C4DFX4 3053 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 LTN1O94822 1766 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 SPENQ96T58 3664 aaKnown RBP-0.08□□□□□ -2.42
KTN1-219ENST00000555164 H0YGG7 62 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 K7EP34 96 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 SMIM11AP58511 58 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 DEFB135Q30KP9 77 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 PCLOQ9Y6V0 5065 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 MTORP42345 2549 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 AKAP13Q12802 2813 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 SUPT6HQ7KZ85 1726 aaKnown RBP-0.08□□□□□ -2.42
KTN1-219ENST00000555164 UTP20O75691 2785 aaKnown RBP-0.08□□□□□ -2.42
KTN1-219ENST00000555164 NBEAL2Q6ZNJ1 2754 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 FAT1Q14517 4588 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 USP9XQ93008 2570 aaPredicted RBP-0.08□□□□□ -2.42
KTN1-219ENST00000555164 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
KTN1-219ENST00000555164 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 PKHD1L1Q86WI1 4243 aa-0.08□□□□□ -2.42
KTN1-219ENST00000555164 DNAH7Q8WXX0 4024 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 GCN1Q92616 2671 aaKnown RBP-0.09□□□□□ -2.42
KTN1-219ENST00000555164 EPPK1P58107 5090 aaKnown RBP-0.09□□□□□ -2.42
KTN1-219ENST00000555164 C4AP0C0L4 1744 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 C4BP0C0L5 1744 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 CCL22O00626 93 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 SPRR2EP22531 72 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 DEFB112Q30KQ8 113 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 H1FX-AS1Q4G0G2 97 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 MRPL34Q9BQ48 92 aaKnown RBP-0.09□□□□□ -2.42
KTN1-219ENST00000555164 PREX1Q8TCU6 1659 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 BPTFQ12830 3046 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 CCDC168Q8NDH2 2452 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 PLIN4Q96Q06 1357 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 LAMA2P24043 3122 aaKnown RBP-0.09□□□□□ -2.42
KTN1-219ENST00000555164 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
KTN1-219ENST00000555164 SONP18583 2426 aaKnown RBP-0.09□□□□□ -2.42
KTN1-219ENST00000555164 USH2AO75445 5202 aa-0.1□□□□□ -2.42
KTN1-219ENST00000555164 MGAM2Q2M2H8 2515 aa-0.1□□□□□ -2.42
KTN1-219ENST00000555164 ITPR1Q14643 2758 aa-0.1□□□□□ -2.42
KTN1-219ENST00000555164 ADAMTS12P58397 1594 aa-0.1□□□□□ -2.42
KTN1-219ENST00000555164 WDR87Q6ZQQ6 2873 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 CLIP1P30622 1438 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.1□□□□□ -2.43
KTN1-219ENST00000555164 PVALEFA0A1B0GWK0 134 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 C9orf62Q8N4C0 152 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 FAT3Q8TDW7 4589 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 CICQ96RK0 1608 aaPredicted RBP-0.1□□□□□ -2.43
KTN1-219ENST00000555164 PKD1P98161 4303 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 CMYA5Q8N3K9 4069 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 DDX60LQ5H9U9 1706 aaKnown RBP-0.1□□□□□ -2.43
KTN1-219ENST00000555164 ATP7BP35670 1465 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 MAGI2Q86UL8 1455 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 SPTBN5Q9NRC6 3674 aaKnown RBP-0.1□□□□□ -2.43
KTN1-219ENST00000555164 HYDINQ4G0P3 5121 aa-0.1□□□□□ -2.43
KTN1-219ENST00000555164 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
KTN1-219ENST00000555164 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
KTN1-219ENST00000555164 TLN2Q9Y4G6 2542 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms