RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 CFAP46Q8IYW2 2715 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 BOD1L1Q8NFC6 3051 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 USP9XQ93008 2570 aaPredicted RBP5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 INSP01308 110 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 PROK1P58294 105 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 Q6YL49 198 aa5.55□□□□□ -1.52
HNRNPC-211ENST00000554455 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
HNRNPC-211ENST00000554455 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
HNRNPC-211ENST00000554455 Q6ZSN1 163 aa5.54□□□□□ -1.52
HNRNPC-211ENST00000554455 ABCA2Q9BZC7 2435 aa5.54□□□□□ -1.52
HNRNPC-211ENST00000554455 ADGRG4Q8IZF6 3080 aa5.53□□□□□ -1.52
HNRNPC-211ENST00000554455 MED13LQ71F56 2210 aa5.53□□□□□ -1.52
HNRNPC-211ENST00000554455 SPTA1P02549 2419 aa5.53□□□□□ -1.52
HNRNPC-211ENST00000554455 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 PRB2P02812 416 aaPredicted RBP5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 DSCR10P59022 87 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 REG3AQ06141 175 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 C4orf3Q8WVX3 66 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 KLK12Q9UKR0 248 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 DOPEY2Q9Y3R5 2298 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 SLURP1P55000 103 aa5.52□□□□□ -1.53
HNRNPC-211ENST00000554455 IGLV5-48A0A075B6I7 105 aa5.51□□□□□ -1.53
HNRNPC-211ENST00000554455 IGHV4-28A0A0C4DH34 117 aa5.51□□□□□ -1.53
HNRNPC-211ENST00000554455 Q8NDZ9 215 aa5.51□□□□□ -1.53
HNRNPC-211ENST00000554455 WNK2Q9Y3S1 2297 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 KRTAP9-2Q9BYQ4 174 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 DCHS2Q6V1P9 2916 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 HTN1P15515 57 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 TEX15Q9BXT5 2789 aa5.5□□□□□ -1.53
HNRNPC-211ENST00000554455 ATMQ13315 3056 aa5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 COL12A1Q99715 3063 aa5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 TLN1Q9Y490 2541 aaKnown RBP5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 TEP1Q99973 2627 aaKnown RBP5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 REG3GQ6UW15 175 aa5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
HNRNPC-211ENST00000554455 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
HNRNPC-211ENST00000554455 MYO9AB2RTY4 2548 aa5.48□□□□□ -1.53
HNRNPC-211ENST00000554455 PTPN13Q12923 2485 aa5.48□□□□□ -1.53
HNRNPC-211ENST00000554455 IGLV1-50A0A075B6I6 118 aa5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 K7EQZ3 153 aa5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 CDK2AP2O75956 126 aa5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 CMC4P56277 68 aaPredicted RBP5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 DEFB136Q30KP8 78 aa5.47□□□□□ -1.53
HNRNPC-211ENST00000554455 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
HNRNPC-211ENST00000554455 KRTAP16-1A8MUX0 517 aa5.46□□□□□ -1.54
HNRNPC-211ENST00000554455 LRBAP50851 2863 aa5.46□□□□□ -1.54
HNRNPC-211ENST00000554455 A0A087WSZ3 146 aa5.45□□□□□ -1.54
HNRNPC-211ENST00000554455 TRGV1A0A0A0MS02 117 aa5.45□□□□□ -1.54
HNRNPC-211ENST00000554455 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
HNRNPC-211ENST00000554455 PRR34Q9NV39 138 aa5.45□□□□□ -1.54
HNRNPC-211ENST00000554455 P0C880 135 aa5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 Q8NBF4 154 aa5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 ANKRD17O75179 2603 aaKnown RBP5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 COL6A6A6NMZ7 2263 aa5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 DEFB131BA0A096LNP1 70 aa5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 TACC2O95359 2948 aa5.44□□□□□ -1.54
HNRNPC-211ENST00000554455 C16orf74Q96GX8 76 aa5.43□□□□□ -1.54
HNRNPC-211ENST00000554455 ZNF861PO60384 105 aa5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 UBR5O95071 2799 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 NOTCH2Q04721 2471 aa5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 SPTAN1Q13813 2472 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 DNAJC9-AS1A6NH13 148 aa5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 HIVEP3Q5T1R4 2406 aa5.42□□□□□ -1.54
HNRNPC-211ENST00000554455 SPTBN1Q01082 2364 aaKnown RBP5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 TNP2Q05952 138 aa5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 MAPK1IP1LQ8NDC0 245 aa5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 RELNP78509 3460 aa5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 ABCA12Q86UK0 2595 aa5.41□□□□□ -1.54
HNRNPC-211ENST00000554455 HRES1P13985 223 aa5.4□□□□□ -1.54
HNRNPC-211ENST00000554455 DEFB113Q30KQ7 82 aa5.4□□□□□ -1.54
HNRNPC-211ENST00000554455 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 DOPEY1Q5JWR5 2465 aa5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 UQCR11O14957 56 aa5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 GIG44P09565 113 aaPredicted RBP5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 XP32Q5T750 250 aa5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
HNRNPC-211ENST00000554455 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
HNRNPC-211ENST00000554455 UTP20O75691 2785 aaKnown RBP5.38□□□□□ -1.55
HNRNPC-211ENST00000554455 FLNCQ14315 2725 aa5.38□□□□□ -1.55
HNRNPC-211ENST00000554455 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
HNRNPC-211ENST00000554455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.37□□□□□ -1.551e-8■■■■■ 51.1
HNRNPC-211ENST00000554455 CSNK1G2-AS1Q8NCQ2 148 aa5.37□□□□□ -1.55
HNRNPC-211ENST00000554455 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
HNRNPC-211ENST00000554455 A0A0J9YWU9 116 aa5.36□□□□□ -1.55
HNRNPC-211ENST00000554455 LRRK2Q5S007 2527 aa5.36□□□□□ -1.55
HNRNPC-211ENST00000554455 GVQW2A0A096LPI5 108 aaPredicted RBP5.35□□□□□ -1.55
HNRNPC-211ENST00000554455 INAFM1C9JVW0 142 aa5.35□□□□□ -1.55
HNRNPC-211ENST00000554455 NBPF19A0A087WUL8 3843 aa5.35□□□□□ -1.55
HNRNPC-211ENST00000554455 USP9YO00507 2555 aaPredicted RBP5.35□□□□□ -1.55
HNRNPC-211ENST00000554455 FBN2P35556 2912 aa5.34□□□□□ -1.55
HNRNPC-211ENST00000554455 A0A1B0GUV1 79 aa5.34□□□□□ -1.56
HNRNPC-211ENST00000554455 KRTAP10-9P60411 292 aa5.33□□□□□ -1.56
HNRNPC-211ENST00000554455 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
HNRNPC-211ENST00000554455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms