RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 PRO0255Q9UI72 69 aa1□□□□□ -2.25
IFT43-208ENST00000554423 CSDC2Q9Y534 153 aaKnown RBP1□□□□□ -2.25
IFT43-208ENST00000554423 ACACBO00763 2458 aa1□□□□□ -2.25
IFT43-208ENST00000554423 FAM208BQ5VWN6 2430 aa1□□□□□ -2.25
IFT43-208ENST00000554423 CSPG4Q6UVK1 2322 aa1□□□□□ -2.25
IFT43-208ENST00000554423 TRRAPQ9Y4A5 3859 aa1□□□□□ -2.25
IFT43-208ENST00000554423 ZFYVE26Q68DK2 2539 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 DNAH1Q9P2D7 4330 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 PDZD2O15018 2839 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 FLNCQ14315 2725 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 HUWE1Q7Z6Z7 4374 aaKnown RBP0.99□□□□□ -2.25
IFT43-208ENST00000554423 TRAV13-2A0A0B4J235 113 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 IGHV3OR16-9A0A0B4J2B5 98 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 TRBV30A0A0K0K1B3 111 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 SMIM9A6NGZ8 99 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 IBA57-AS1B1ANH7 110 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 H3BT86 120 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 LST1O00453 97 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 LECT2O14960 151 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 DNAL4O96015 105 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 BAALC-AS2P0C853 105 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 MIFP14174 115 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 MRPL23Q16540 153 aaKnown RBP0.99□□□□□ -2.25
IFT43-208ENST00000554423 DEFB121Q5J5C9 76 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 S100A7L2Q5SY68 101 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 LELP1Q5T871 98 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 LYPD5Q6UWN5 251 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 UNQ6190/PRO20217Q6UXQ8 127 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 Q8IZM0 81 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 LINC00337Q8N6G1 96 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 C15orf53Q8NAA6 179 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 COPS9Q8WXC6 57 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 ZANQ9Y493 2812 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 TENM4Q6N022 2769 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 SORL1Q92673 2214 aa0.99□□□□□ -2.25
IFT43-208ENST00000554423 ABCA12Q86UK0 2595 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 DEFB131BA0A096LNP1 70 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 A0A1W2PNN7 141 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 SNCGO76070 127 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 RPL28P46779 137 aaKnown RBP0.98□□□□□ -2.25
IFT43-208ENST00000554423 RPL18AQ02543 176 aaKnown RBP0.98□□□□□ -2.25
IFT43-208ENST00000554423 ESRGQ1W209 222 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 C6orf99Q4VX62 202 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 ENHOQ6UWT2 76 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 Q8NDZ9 215 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 WFDC9Q8NEX5 89 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 XAGE1AQ9HD64 81 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 C14orf132Q9NPU4 83 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 C6orf48Q9UBA6 75 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 APCP25054 2843 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 MAP1AP78559 2803 aaPredicted RBP0.98□□□□□ -2.25
IFT43-208ENST00000554423 TEX15Q9BXT5 2789 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 SONP18583 2426 aaKnown RBP0.98□□□□□ -2.25
IFT43-208ENST00000554423 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 ITPR3Q14573 2671 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 WNK1Q9H4A3 2382 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 USP9YO00507 2555 aaPredicted RBP0.98□□□□□ -2.25
IFT43-208ENST00000554423 MYO18BQ8IUG5 2567 aa0.98□□□□□ -2.25
IFT43-208ENST00000554423 PTPN13Q12923 2485 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 FLNAP21333 2647 aaKnown RBP0.97□□□□□ -2.25
IFT43-208ENST00000554423 MXRA5Q9NR99 2828 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 TRAV23DV6A0A075B6W5 121 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 IGKV3D-7A0A0C4DH55 119 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 FAM236AA0A1B0GUQ0 79 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 FAM236BA0A1B0GV22 79 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 CCDC179H3BU77 68 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 K7EIL1 84 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 M0QXV9 152 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 TRACP01848 142 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 IGLV7-43P04211 117 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 SCGB1A1P11684 91 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 SEC61GP60059 68 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 SDIM1Q6ZPB5 146 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 Q6ZRU5 148 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 SMCR5Q8TEV8 140 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 DIRC1Q969H9 104 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 ANAPC13Q9BS18 74 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 ORMDL1Q9P0S3 153 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 SS18L2Q9UHA2 77 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 LAMTOR3Q9UHA4 124 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 C22orf24Q9Y442 160 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 LYSTQ99698 3801 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 DNAH9Q9NYC9 4486 aa0.97□□□□□ -2.25
IFT43-208ENST00000554423 FASNP49327 2511 aaKnown RBP0.96□□□□□ -2.26
IFT43-208ENST00000554423 LRRK2Q5S007 2527 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 DYNC2H1Q8NCM8 4307 aaKnown RBP0.96□□□□□ -2.26
IFT43-208ENST00000554423 CENPEQ02224 2701 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 CHD6Q8TD26 2715 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 CCDC168Q8NDH2 2452 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 PLECQ15149 4684 aaKnown RBP0.96□□□□□ -2.26
IFT43-208ENST00000554423 FN1P02751 2386 aaKnown RBP0.96□□□□□ -2.26
IFT43-208ENST00000554423 EPG5Q9HCE0 2579 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 A0A087WVE0 104 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 TRAV10A0A0B4J240 114 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 TRBV10-3A0A0K0K1G6 114 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 hADV29S1A0JD25 119 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 H0YGX0 51 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 M0R2N4 97 aa0.96□□□□□ -2.26
IFT43-208ENST00000554423 NDUFC2O95298 119 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms