RNA–Protein interactions for RNA: ENST00000554072.1

SLC38A6-217, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-217ENST00000554072 ATRQ13535 2644 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 TRAV21A0A0B4J279 112 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 DEFB135Q30KP9 77 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 HSPG2P98160 4391 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 SPTA1P02549 2419 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 NESP48681 1621 aa-0.02□□□□□ -2.41
SLC38A6-217ENST00000554072 EP300Q09472 2414 aaPredicted RBP-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 C4AP0C0L4 1744 aa-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 C4BP0C0L5 1744 aa-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 USP32Q8NFA0 1604 aa-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 ALMS1Q8TCU4 4167 aa-0.03□□□□□ -2.41
SLC38A6-217ENST00000554072 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.42
SLC38A6-217ENST00000554072 DCAF1Q9Y4B6 1507 aa-0.04□□□□□ -2.42
SLC38A6-217ENST00000554072 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
SLC38A6-217ENST00000554072 CCDC88BA6NC98 1476 aa-0.04□□□□□ -2.42
SLC38A6-217ENST00000554072 DOT1LQ8TEK3 1739 aa-0.04□□□□□ -2.42
SLC38A6-217ENST00000554072 HECTD4Q9Y4D8 3996 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 DIP2BQ9P265 1576 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 ADIRFQ15847 76 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 TDRG1Q3Y452 100 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 LELP1Q5T871 98 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 ATP5EP2Q5VTU8 51 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 S100A13Q99584 98 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 ST20Q9HBF5 79 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 ARFGEF2Q9Y6D5 1785 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 NCOA2Q15596 1464 aa-0.05□□□□□ -2.42
SLC38A6-217ENST00000554072 KDM5DQ9BY66 1539 aa-0.06□□□□□ -2.42
SLC38A6-217ENST00000554072 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
SLC38A6-217ENST00000554072 CFAP43Q8NDM7 1665 aa-0.06□□□□□ -2.42
SLC38A6-217ENST00000554072 MAP1BP46821 2468 aaKnown RBP-0.06□□□□□ -2.42
SLC38A6-217ENST00000554072 PRKDCP78527 4128 aaKnown RBP-0.06□□□□□ -2.42
SLC38A6-217ENST00000554072 ZNF831Q5JPB2 1677 aa-0.07□□□□□ -2.42
SLC38A6-217ENST00000554072 REV3LO60673 3130 aa-0.07□□□□□ -2.42
SLC38A6-217ENST00000554072 CICQ96RK0 1608 aaPredicted RBP-0.07□□□□□ -2.42
SLC38A6-217ENST00000554072 PTPN23Q9H3S7 1636 aa-0.08□□□□□ -2.42
SLC38A6-217ENST00000554072 ADAMTS12P58397 1594 aa-0.08□□□□□ -2.42
SLC38A6-217ENST00000554072 ABCC1P33527 1531 aa-0.08□□□□□ -2.42
SLC38A6-217ENST00000554072 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
SLC38A6-217ENST00000554072 COL6A3P12111 3177 aa-0.08□□□□□ -2.42
SLC38A6-217ENST00000554072 ERVK-7P63135 1459 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 CFAP74Q9C0B2 1584 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 H0YGG7 62 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 NDUFA3O95167 84 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 IFI27P40305 119 aaPredicted RBP-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 SETXQ7Z333 2677 aaKnown RBP-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 APC2O95996 2303 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 SCN11AQ9UI33 1791 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 CHD8Q9HCK8 2581 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
SLC38A6-217ENST00000554072 WNK1Q9H4A3 2382 aa-0.1□□□□□ -2.42
SLC38A6-217ENST00000554072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.1□□□□□ -2.432e-6■■■■□ 24
SLC38A6-217ENST00000554072 UMAD1C9J7I0 102 aa-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 SPRR2AP35326 72 aa-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 SCRIBQ14160 1630 aa-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 DDX60LQ5H9U9 1706 aaKnown RBP-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 LRP2P98164 4655 aa-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 ARHGAP35Q9NRY4 1499 aa-0.1□□□□□ -2.43
SLC38A6-217ENST00000554072 PLXNC1O60486 1568 aa-0.11□□□□□ -2.43
SLC38A6-217ENST00000554072 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
SLC38A6-217ENST00000554072 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
SLC38A6-217ENST00000554072 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
SLC38A6-217ENST00000554072 PLCH1Q4KWH8 1693 aa-0.11□□□□□ -2.43
SLC38A6-217ENST00000554072 A0A087WXM4 84 aa-0.12□□□□□ -2.43
SLC38A6-217ENST00000554072 C3orf79P0CE67 100 aa-0.12□□□□□ -2.43
SLC38A6-217ENST00000554072 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
SLC38A6-217ENST00000554072 DEPDC5O75140 1603 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 H3BUT2 72 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 SPRR2EP22531 72 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 KRTAP6-2Q3LI66 62 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 DEFB121Q5J5C9 76 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 PRO3102Q9H379 93 aa-0.13□□□□□ -2.43
SLC38A6-217ENST00000554072 WIZO95785 1651 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 LCE6AA0A183 80 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 IFI6P09912 130 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 HMGA1P17096 107 aaKnown RBP-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 NREPQ16612 68 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 ACANP16112 2415 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 MAP3K1Q13233 1512 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 ANKRD50Q9ULJ7 1429 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 TRANK1O15050 2925 aa-0.14□□□□□ -2.43
SLC38A6-217ENST00000554072 RICTORQ6R327 1708 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 H3BNG1 76 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 NDUFA4O00483 81 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 LINC00158P58513 81 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 CNOT1A5YKK6 2376 aaKnown RBP-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 SRRM2Q9UQ35 2752 aaKnown RBP-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 HFM1A2PYH4 1435 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 RRBP1Q9P2E9 1410 aaKnown RBP-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 LRP1BQ9NZR2 4599 aa-0.15□□□□□ -2.43
SLC38A6-217ENST00000554072 PCNX1Q96RV3 2341 aa-0.16□□□□□ -2.43
SLC38A6-217ENST00000554072 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
SLC38A6-217ENST00000554072 SMIM13P0DJ93 91 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms