RNA–Protein interactions for RNA: ENST00000554072.1

SLC38A6-217, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-217ENST00000554072 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
SLC38A6-217ENST00000554072 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
SLC38A6-217ENST00000554072 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
SLC38A6-217ENST00000554072 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
SLC38A6-217ENST00000554072 POTEDQ86YR6 584 aa22.53■■□□□ 1.2
SLC38A6-217ENST00000554072 FOXD1Q16676 465 aa22.43■■□□□ 1.18
SLC38A6-217ENST00000554072 MSH5O43196 834 aa21.26■□□□□ 0.99
SLC38A6-217ENST00000554072 PIAS4Q8N2W9 510 aaPredicted RBP20.69■□□□□ 0.9
SLC38A6-217ENST00000554072 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
SLC38A6-217ENST00000554072 ADRA2BP18089 450 aa20.12■□□□□ 0.81
SLC38A6-217ENST00000554072 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
SLC38A6-217ENST00000554072 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
SLC38A6-217ENST00000554072 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
SLC38A6-217ENST00000554072 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
SLC38A6-217ENST00000554072 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
SLC38A6-217ENST00000554072 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
SLC38A6-217ENST00000554072 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
SLC38A6-217ENST00000554072 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
SLC38A6-217ENST00000554072 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
SLC38A6-217ENST00000554072 POTEHQ6S545 545 aa17.44■□□□□ 0.38
SLC38A6-217ENST00000554072 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
SLC38A6-217ENST00000554072 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
SLC38A6-217ENST00000554072 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
SLC38A6-217ENST00000554072 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
SLC38A6-217ENST00000554072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
SLC38A6-217ENST00000554072 DSG3P32926 999 aa16.65■□□□□ 0.26
SLC38A6-217ENST00000554072 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
SLC38A6-217ENST00000554072 CAPN15O75808 1086 aa16.48■□□□□ 0.23
SLC38A6-217ENST00000554072 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
SLC38A6-217ENST00000554072 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
SLC38A6-217ENST00000554072 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
SLC38A6-217ENST00000554072 ABCB7O75027 752 aa16.07■□□□□ 0.16
SLC38A6-217ENST00000554072 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
SLC38A6-217ENST00000554072 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
SLC38A6-217ENST00000554072 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
SLC38A6-217ENST00000554072 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
SLC38A6-217ENST00000554072 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SLC38A6-217ENST00000554072 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
SLC38A6-217ENST00000554072 APLP2Q06481 763 aa15.7■□□□□ 0.1
SLC38A6-217ENST00000554072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SLC38A6-217ENST00000554072 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SLC38A6-217ENST00000554072 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
SLC38A6-217ENST00000554072 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
SLC38A6-217ENST00000554072 POLA2Q14181 598 aa15.33■□□□□ 0.04
SLC38A6-217ENST00000554072 HAX1O00165 279 aa15.32■□□□□ 0.04
SLC38A6-217ENST00000554072 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
SLC38A6-217ENST00000554072 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SLC38A6-217ENST00000554072 EVX2Q03828 476 aa15.16■□□□□ 0.02
SLC38A6-217ENST00000554072 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
SLC38A6-217ENST00000554072 PITPNM1O00562 1244 aa15.06■□□□□ 0
SLC38A6-217ENST00000554072 KCNA4P22459 653 aa14.99□□□□□ -0.01
SLC38A6-217ENST00000554072 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
SLC38A6-217ENST00000554072 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
SLC38A6-217ENST00000554072 LHX8Q68G74 356 aa14.87□□□□□ -0.03
SLC38A6-217ENST00000554072 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
SLC38A6-217ENST00000554072 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.05
SLC38A6-217ENST00000554072 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
SLC38A6-217ENST00000554072 GABBR2O75899 941 aa14.69□□□□□ -0.06
SLC38A6-217ENST00000554072 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
SLC38A6-217ENST00000554072 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
SLC38A6-217ENST00000554072 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
SLC38A6-217ENST00000554072 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
SLC38A6-217ENST00000554072 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
SLC38A6-217ENST00000554072 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
SLC38A6-217ENST00000554072 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
SLC38A6-217ENST00000554072 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
SLC38A6-217ENST00000554072 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
SLC38A6-217ENST00000554072 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
SLC38A6-217ENST00000554072 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
SLC38A6-217ENST00000554072 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
SLC38A6-217ENST00000554072 FBLN2P98095 1184 aa14.09□□□□□ -0.15
SLC38A6-217ENST00000554072 POTEMA6NI47 508 aa14.07□□□□□ -0.16
SLC38A6-217ENST00000554072 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
SLC38A6-217ENST00000554072 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
SLC38A6-217ENST00000554072 DCBLD2Q96PD2 775 aa14.03□□□□□ -0.16
SLC38A6-217ENST00000554072 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
SLC38A6-217ENST00000554072 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
SLC38A6-217ENST00000554072 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
SLC38A6-217ENST00000554072 CLCN6P51797 869 aa13.96□□□□□ -0.17
SLC38A6-217ENST00000554072 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
SLC38A6-217ENST00000554072 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
SLC38A6-217ENST00000554072 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
SLC38A6-217ENST00000554072 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
SLC38A6-217ENST00000554072 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SLC38A6-217ENST00000554072 ZBTB22O15209 634 aa13.82□□□□□ -0.2
SLC38A6-217ENST00000554072 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
SLC38A6-217ENST00000554072 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
SLC38A6-217ENST00000554072 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
SLC38A6-217ENST00000554072 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
SLC38A6-217ENST00000554072 LCE2DQ5TA82 110 aaPredicted RBP13.66□□□□□ -0.22
SLC38A6-217ENST00000554072 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
SLC38A6-217ENST00000554072 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
SLC38A6-217ENST00000554072 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
SLC38A6-217ENST00000554072 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
SLC38A6-217ENST00000554072 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
SLC38A6-217ENST00000554072 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
SLC38A6-217ENST00000554072 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
SLC38A6-217ENST00000554072 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
SLC38A6-217ENST00000554072 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
SLC38A6-217ENST00000554072 C7P10643 843 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms