RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 ABCC3O15438 1527 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 MAGI2Q86UL8 1455 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 ZFHX3Q15911 3703 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 ANKRD50Q9ULJ7 1429 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 MAP3K4Q9Y6R4 1608 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 PDZD2O15018 2839 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 KMT2AQ03164 3969 aa-0.06□□□□□ -2.42
USP44-207ENST00000552237 C4AP0C0L4 1744 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 C4BP0C0L5 1744 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 NF1P21359 2839 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 MAP1AP78559 2803 aaPredicted RBP-0.07□□□□□ -2.42
USP44-207ENST00000552237 ATP7BP35670 1465 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 NRXN1Q9ULB1 1477 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 TRANK1O15050 2925 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 MYMXA0A1B0GTQ4 84 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 CEBPZOSA8MTT3 80 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 SPRR2AP35326 72 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 LINC00643Q86TS7 51 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 S100A16Q96FQ6 103 aaKnown RBP-0.07□□□□□ -2.42
USP44-207ENST00000552237 PRO3102Q9H379 93 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 TROQ12816 1431 aaPredicted RBP-0.07□□□□□ -2.42
USP44-207ENST00000552237 MXRA5Q9NR99 2828 aa-0.07□□□□□ -2.42
USP44-207ENST00000552237 THOC2Q8NI27 1593 aaKnown RBP-0.07□□□□□ -2.42
USP44-207ENST00000552237 DDX60LQ5H9U9 1706 aaKnown RBP-0.07□□□□□ -2.42
USP44-207ENST00000552237 URB2Q14146 1524 aaKnown RBP-0.08□□□□□ -2.42
USP44-207ENST00000552237 MTORP42345 2549 aa-0.08□□□□□ -2.42
USP44-207ENST00000552237 MRPL33O75394 65 aaKnown RBP-0.08□□□□□ -2.42
USP44-207ENST00000552237 ATP5EP2Q5VTU8 51 aa-0.08□□□□□ -2.42
USP44-207ENST00000552237 FAM186AA6NE01 2351 aa-0.08□□□□□ -2.42
USP44-207ENST00000552237 CEP162Q5TB80 1403 aa-0.08□□□□□ -2.42
USP44-207ENST00000552237 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.08□□□□□ -2.42
USP44-207ENST00000552237 NESP48681 1621 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 CICQ96RK0 1608 aaPredicted RBP-0.09□□□□□ -2.42
USP44-207ENST00000552237 POLR1AO95602 1720 aaPredicted RBP-0.09□□□□□ -2.42
USP44-207ENST00000552237 UACAQ9BZF9 1416 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 A0A087WXM4 84 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 TRAV21A0A0B4J279 112 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 C9orf92A6NGG3 77 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 H3BNG1 76 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 KRTAP19-7Q3SYF9 63 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 MAGI3Q5TCQ9 1506 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 HECTD4Q9Y4D8 3996 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 KIF14Q15058 1648 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 BSNQ9UPA5 3926 aa-0.09□□□□□ -2.42
USP44-207ENST00000552237 CCDC88BA6NC98 1476 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 ABCC10Q5T3U5 1492 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 TGP01266 2768 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 NWD1Q149M9 1564 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 TTC37Q6PGP7 1564 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 HECTD1Q9ULT8 2610 aa-0.1□□□□□ -2.42
USP44-207ENST00000552237 REV3LO60673 3130 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 UMAD1C9J7I0 102 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 NDUFA3O95167 84 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 LINC00158P58513 81 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 ADIRFQ15847 76 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 S100A13Q99584 98 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 SNHG12Q9BXW3 62 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 LRRK2Q5S007 2527 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 UBR1Q8IWV7 1749 aa-0.1□□□□□ -2.43
USP44-207ENST00000552237 ARFGEF2Q9Y6D5 1785 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 HSPG2P98160 4391 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 DEPDC5O75140 1603 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 K7EP34 96 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 C20orf78Q9BR46 151 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 RGPD1P0DJD0 1748 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 TNXBP22105 4242 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 CEP290O15078 2479 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 ADAMTS12P58397 1594 aa-0.11□□□□□ -2.43
USP44-207ENST00000552237 HTTP42858 3142 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 LPAP08519 4548 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 IFI6P09912 130 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 LRP2P98164 4655 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 CFAP43Q8NDM7 1665 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 PKD1L2Q7Z442 2459 aa-0.12□□□□□ -2.43
USP44-207ENST00000552237 HFM1A2PYH4 1435 aa-0.13□□□□□ -2.43
USP44-207ENST00000552237 NEXMIFQ5QGS0 1516 aa-0.13□□□□□ -2.43
USP44-207ENST00000552237 PIK3C2BO00750 1634 aa-0.13□□□□□ -2.43
USP44-207ENST00000552237 SONP18583 2426 aaKnown RBP-0.13□□□□□ -2.43
USP44-207ENST00000552237 ITSN1Q15811 1721 aa-0.13□□□□□ -2.43
USP44-207ENST00000552237 PRRC2CQ9Y520 2896 aaKnown RBP-0.13□□□□□ -2.43
USP44-207ENST00000552237 CCDC168Q8NDH2 2452 aa-0.13□□□□□ -2.43
USP44-207ENST00000552237 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 UBL5Q9BZL1 73 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 TEP1Q99973 2627 aaKnown RBP-0.14□□□□□ -2.43
USP44-207ENST00000552237 USP32Q8NFA0 1604 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 PLCH1Q4KWH8 1693 aa-0.14□□□□□ -2.43
USP44-207ENST00000552237 PLXNC1O60486 1568 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 FASNP49327 2511 aaKnown RBP-0.15□□□□□ -2.43
USP44-207ENST00000552237 NEBP20929 6669 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 DOT1LQ8TEK3 1739 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 NDUFA4O00483 81 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 SPRR2EP22531 72 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms