RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 MED14O60244 1454 aa0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 NKTRP30414 1462 aaKnown RBP0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 CCDC141Q6ZP82 1450 aa0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 TLN1Q9Y490 2541 aaKnown RBP0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 PRRC2CQ9Y520 2896 aaKnown RBP0.27□□□□□ -2.37
LSM6P2-201ENST00000552208 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 VCANP13611 3396 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 CYB5AP00167 134 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 TDRG1Q3Y452 100 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 CFAP47Q6ZTR5 3102 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 SPEGQ15772 3267 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 LAMA3Q16787 3333 aa0.26□□□□□ -2.37
LSM6P2-201ENST00000552208 ITPR2Q14571 2701 aa0.25□□□□□ -2.37
LSM6P2-201ENST00000552208 LRRC37AA6NMS7 1700 aa0.25□□□□□ -2.37
LSM6P2-201ENST00000552208 DNHD1Q96M86 4753 aa0.25□□□□□ -2.37
LSM6P2-201ENST00000552208 USH2AO75445 5202 aa0.25□□□□□ -2.37
LSM6P2-201ENST00000552208 CRYBG1Q9Y4K1 1723 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 ALKQ9UM73 1620 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 ATP7BP35670 1465 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 URB1O60287 2271 aaKnown RBP0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 IQCF6A8MYZ5 107 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 COX8AP10176 69 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 PCNX1Q96RV3 2341 aa0.24□□□□□ -2.37
LSM6P2-201ENST00000552208 ALMS1Q8TCU4 4167 aa0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 SPTAN1Q13813 2472 aaKnown RBP0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 RABAC1Q9UI14 185 aa0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 MKI67P46013 3256 aaKnown RBP0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
LSM6P2-201ENST00000552208 DNAH12Q6ZR08 3092 aa0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 NBEAQ8NFP9 2946 aa0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 EYSQ5T1H1 3165 aa0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 EP400Q96L91 3159 aa0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 SNRPFP62306 86 aaKnown RBP0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 RGPD4Q7Z3J3 1758 aa0.22□□□□□ -2.37
LSM6P2-201ENST00000552208 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 HERC2O95714 4834 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 WNK2Q9Y3S1 2297 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 PLGLAQ15195 96 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 DEFB105AQ8NG35 78 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 MTORP42345 2549 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 CEP250Q9BV73 2442 aa0.21□□□□□ -2.38
LSM6P2-201ENST00000552208 KIF14Q15058 1648 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 DCHS1Q96JQ0 3298 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 MYMXA0A1B0GTQ4 84 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 LINC00643Q86TS7 51 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 MAGI2Q86UL8 1455 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 MUC12Q9UKN1 5478 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 TMEM131LA2VDJ0 1609 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 TSC2P49815 1807 aa0.2□□□□□ -2.38
LSM6P2-201ENST00000552208 FAM186AA6NE01 2351 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 FMN2Q9NZ56 1722 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 MYH4Q9Y623 1939 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 CPSF4LA6NMK7 179 aaKnown RBP0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 DEFB112Q30KQ8 113 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 NIPBLQ6KC79 2804 aaeCLIP0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 RELNP78509 3460 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 RGPD3A6NKT7 1758 aaPredicted RBP0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
LSM6P2-201ENST00000552208 MUC3AQ02505 3323 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 LRBAP50851 2863 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 NF1P21359 2839 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 MAP3K4Q9Y6R4 1608 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 A0A1B0GUT8 65 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 I3L3M4 83 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 LAMA1P25391 3075 aa0.18□□□□□ -2.38
LSM6P2-201ENST00000552208 WDR87Q6ZQQ6 2873 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 LRRC9Q6ZRR7 1453 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 PPLO60437 1756 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 HSPG2P98160 4391 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 SPTY2D1-AS1A0A0U1RR47 76 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 PRM1P04553 51 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 KLK9Q2XQG4 91 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 C5orf42Q9H799 3197 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 LRRC7Q96NW7 1537 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 HECTD4Q9Y4D8 3996 aa0.17□□□□□ -2.38
LSM6P2-201ENST00000552208 MRPL34Q9BQ48 92 aaKnown RBP0.16□□□□□ -2.38
LSM6P2-201ENST00000552208 SPTA1P02549 2419 aa0.16□□□□□ -2.38
LSM6P2-201ENST00000552208 ANKRD36A6QL64 1941 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 SRRM2Q9UQ35 2752 aaKnown RBP0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 SPINK4O60575 86 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 ACYP1P07311 99 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 FXYD6Q9H0Q3 95 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 APLNQ9ULZ1 77 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 RGPD1P0DJD0 1748 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 CRYBG3Q68DQ2 2970 aa0.15□□□□□ -2.39
LSM6P2-201ENST00000552208 CEP290O15078 2479 aa0.14□□□□□ -2.39
LSM6P2-201ENST00000552208 USP32Q8NFA0 1604 aa0.14□□□□□ -2.39
LSM6P2-201ENST00000552208 COX7BP24311 80 aa0.14□□□□□ -2.39
LSM6P2-201ENST00000552208 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
LSM6P2-201ENST00000552208 CCDC18Q5T9S5 1454 aa0.14□□□□□ -2.39
LSM6P2-201ENST00000552208 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 PKD1L3Q7Z443 1732 aa0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 DMXL2Q8TDJ6 3036 aa0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 CEBPZOSA8MTT3 80 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms