RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 XAGE1AQ9HD64 81 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 FBN2P35556 2912 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 SONP18583 2426 aaKnown RBP3.54□□□□□ -1.84
CCNT1-204ENST00000551989 HIVEP2P31629 2446 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 CFAP46Q8IYW2 2715 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 FLNAP21333 2647 aaKnown RBP3.53□□□□□ -1.84
CCNT1-204ENST00000551989 POLQO75417 2590 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 SPRR1AP35321 89 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 NREPQ16612 68 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 Q6ZRX8 168 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 SMR3AQ99954 134 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
CCNT1-204ENST00000551989 CHD6Q8TD26 2715 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 IGKV2D-24A0A075B6R9 120 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 DEFB131BA0A096LNP1 70 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 BPY2O14599 106 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 PLA2G1BP04054 148 aaKnown RBP3.52□□□□□ -1.85
CCNT1-204ENST00000551989 ESRGQ1W209 222 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 Q6ZRP5 223 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 Q6ZTC4 211 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 C11orf45Q8TAV5 145 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 ASH1LQ9NR48 2969 aaKnown RBP3.52□□□□□ -1.85
CCNT1-204ENST00000551989 FLNCQ14315 2725 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 MXRA5Q9NR99 2828 aa3.52□□□□□ -1.85
CCNT1-204ENST00000551989 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 M0R2N4 97 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 C1orf195Q5TG92 126 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 C7orf33Q8WU49 177 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 SPRR4Q96PI1 79 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 ABCA12Q86UK0 2595 aa3.51□□□□□ -1.85
CCNT1-204ENST00000551989 JMJD1CQ15652 2540 aa3.5□□□□□ -1.85
CCNT1-204ENST00000551989 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
CCNT1-204ENST00000551989 KRTAP4-16G5E9R7 235 aaPredicted RBP3.5□□□□□ -1.85
CCNT1-204ENST00000551989 Q8NBF4 154 aa3.5□□□□□ -1.85
CCNT1-204ENST00000551989 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
CCNT1-204ENST00000551989 ZANQ9Y493 2812 aa3.5□□□□□ -1.85
CCNT1-204ENST00000551989 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
CCNT1-204ENST00000551989 SETXQ7Z333 2677 aaKnown RBP3.49□□□□□ -1.85
CCNT1-204ENST00000551989 APCP25054 2843 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 COL12A1Q99715 3063 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 A0A0U1RQV1 116 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 F8WEM9 126 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 Q8N377 158 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 EPG5Q9HCE0 2579 aa3.49□□□□□ -1.85
CCNT1-204ENST00000551989 LCE6AA0A183 80 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 Q5XG85 94 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
CCNT1-204ENST00000551989 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 PDZD2O15018 2839 aa3.48□□□□□ -1.85
CCNT1-204ENST00000551989 CCDC168Q8NDH2 2452 aa3.47□□□□□ -1.85
CCNT1-204ENST00000551989 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
CCNT1-204ENST00000551989 KRTAP10-11P60412 298 aa3.47□□□□□ -1.85
CCNT1-204ENST00000551989 TM2D3Q9BRN9 247 aa3.47□□□□□ -1.85
CCNT1-204ENST00000551989 CRYBG3Q68DQ2 2970 aa3.47□□□□□ -1.85
CCNT1-204ENST00000551989 NDUFB1O75438 58 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 OXTP01178 125 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 Q9BRP9 147 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
CCNT1-204ENST00000551989 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
CCNT1-204ENST00000551989 NOTCH2Q04721 2471 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 CELSR2Q9HCU4 2923 aa3.46□□□□□ -1.86
CCNT1-204ENST00000551989 A0A1W2PNM2 257 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 H0Y9J4 135 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 C3orf84H3BNL1 204 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 H3BPC8 53 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
CCNT1-204ENST00000551989 Q75L30 129 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 SCXQ7RTU7 201 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 LINC00588Q9Y4M8 146 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 SNURFQ9Y675 71 aa3.45□□□□□ -1.86
CCNT1-204ENST00000551989 C16orf90A8MZG2 172 aa3.44□□□□□ -1.86
CCNT1-204ENST00000551989 SPRR1BP22528 89 aa3.44□□□□□ -1.86
CCNT1-204ENST00000551989 UBE2BP63146 152 aa3.44□□□□□ -1.86
CCNT1-204ENST00000551989 DEFB105AQ8NG35 78 aa3.44□□□□□ -1.86
CCNT1-204ENST00000551989 ACANP16112 2415 aa3.44□□□□□ -1.86
CCNT1-204ENST00000551989 HCG22E2RYF7 251 aa3.43□□□□□ -1.86
CCNT1-204ENST00000551989 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
CCNT1-204ENST00000551989 CSMD2Q7Z408 3487 aa3.43□□□□□ -1.86
CCNT1-204ENST00000551989 MAP1AP78559 2803 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-204ENST00000551989 MTORP42345 2549 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 ZFYVE26Q68DK2 2539 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 KRTAP24-1Q3LI83 254 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 ZCCHC13Q8WW36 166 aaKnown RBP3.42□□□□□ -1.86
CCNT1-204ENST00000551989 LINC00476Q8WZB0 136 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 CYP4F30PQ9H0H9 118 aa3.42□□□□□ -1.86
CCNT1-204ENST00000551989 LINC00474Q9P2X8 69 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms