RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 M0R2T5 61 aa-0.05□□□□□ -2.42
CPNE8-208ENST00000551855 RABAC1Q9UI14 185 aa-0.05□□□□□ -2.42
CPNE8-208ENST00000551855 SCN11AQ9UI33 1791 aa-0.05□□□□□ -2.42
CPNE8-208ENST00000551855 HECTD4Q9Y4D8 3996 aa-0.05□□□□□ -2.42
CPNE8-208ENST00000551855 FLNCQ14315 2725 aa-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 ARFGEF2Q9Y6D5 1785 aa-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 CCL22O00626 93 aa-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 NDUFA3O95167 84 aa-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 CCDC18Q5T9S5 1454 aa-0.06□□□□□ -2.42
CPNE8-208ENST00000551855 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
CPNE8-208ENST00000551855 ST20Q9HBF5 79 aa-0.07□□□□□ -2.42
CPNE8-208ENST00000551855 CDKN2A-AS1Q9UH64 79 aa-0.07□□□□□ -2.42
CPNE8-208ENST00000551855 MAP1BP46821 2468 aaKnown RBP-0.07□□□□□ -2.42
CPNE8-208ENST00000551855 WNK1Q9H4A3 2382 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 ERVK-7P63135 1459 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 NESP48681 1621 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 KANTRA0A1W2PQU2 76 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 H3BUT2 72 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 ACYP1P07311 99 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 DCAF1Q9Y4B6 1507 aa-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 EP300Q09472 2414 aaPredicted RBP-0.08□□□□□ -2.42
CPNE8-208ENST00000551855 RGPD8O14715 1765 aaPredicted RBP-0.09□□□□□ -2.42
CPNE8-208ENST00000551855 RGPD5Q99666 1765 aa-0.09□□□□□ -2.42
CPNE8-208ENST00000551855 NWD1Q149M9 1564 aa-0.09□□□□□ -2.42
CPNE8-208ENST00000551855 IFI6P09912 130 aa-0.09□□□□□ -2.42
CPNE8-208ENST00000551855 ADIRFQ15847 76 aa-0.09□□□□□ -2.42
CPNE8-208ENST00000551855 KNL1Q8NG31 2342 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 PLCH1Q4KWH8 1693 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 DEFB135Q30KP9 77 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 S100A13Q99584 98 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 URB2Q14146 1524 aaKnown RBP-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 RICTORQ6R327 1708 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 ARHGAP35Q9NRY4 1499 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 CHD8Q9HCK8 2581 aa-0.1□□□□□ -2.43
CPNE8-208ENST00000551855 LRP2P98164 4655 aa-0.11□□□□□ -2.43
CPNE8-208ENST00000551855 RPL38P63173 70 aaKnown RBP-0.11□□□□□ -2.43
CPNE8-208ENST00000551855 REV3LO60673 3130 aa-0.11□□□□□ -2.43
CPNE8-208ENST00000551855 SETXQ7Z333 2677 aaKnown RBP-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 NSD1Q96L73 2696 aaPredicted RBP-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 DEFA5Q01523 94 aa-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 BVES-AS1Q5T3Y7 98 aa-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 APC2O95996 2303 aa-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 CFAP43Q8NDM7 1665 aa-0.12□□□□□ -2.43
CPNE8-208ENST00000551855 ADAMTS12P58397 1594 aa-0.13□□□□□ -2.43
CPNE8-208ENST00000551855 MAGI3Q5TCQ9 1506 aa-0.13□□□□□ -2.43
CPNE8-208ENST00000551855 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
CPNE8-208ENST00000551855 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
CPNE8-208ENST00000551855 UMAD1C9J7I0 102 aa-0.14□□□□□ -2.43
CPNE8-208ENST00000551855 SMIM13P0DJ93 91 aa-0.14□□□□□ -2.43
CPNE8-208ENST00000551855 SPRR2BP35325 72 aa-0.14□□□□□ -2.43
CPNE8-208ENST00000551855 LRRIQ1Q96JM4 1722 aa-0.14□□□□□ -2.43
CPNE8-208ENST00000551855 DDX60LQ5H9U9 1706 aaKnown RBP-0.15□□□□□ -2.43
CPNE8-208ENST00000551855 CICQ96RK0 1608 aaPredicted RBP-0.15□□□□□ -2.43
CPNE8-208ENST00000551855 A0A087WXM4 84 aa-0.15□□□□□ -2.43
CPNE8-208ENST00000551855 NDUFB1O75438 58 aa-0.15□□□□□ -2.43
CPNE8-208ENST00000551855 NREPQ16612 68 aa-0.15□□□□□ -2.43
CPNE8-208ENST00000551855 FLNBO75369 2602 aaKnown RBP-0.16□□□□□ -2.43
CPNE8-208ENST00000551855 DEFB121Q5J5C9 76 aa-0.16□□□□□ -2.44
CPNE8-208ENST00000551855 ACANP16112 2415 aa-0.16□□□□□ -2.44
CPNE8-208ENST00000551855 KDM5DQ9BY66 1539 aa-0.17□□□□□ -2.44
CPNE8-208ENST00000551855 ZANQ9Y493 2812 aa-0.17□□□□□ -2.44
CPNE8-208ENST00000551855 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
CPNE8-208ENST00000551855 NDUFA4O00483 81 aa-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 IFI27P40305 119 aaPredicted RBP-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 COL6A3P12111 3177 aa-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 STAB1Q9NY15 2570 aa-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 FLNAP21333 2647 aaKnown RBP-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 TJP1Q07157 1748 aa-0.18□□□□□ -2.44
CPNE8-208ENST00000551855 CFAP74Q9C0B2 1584 aa-0.19□□□□□ -2.44
CPNE8-208ENST00000551855 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
CPNE8-208ENST00000551855 LINC00158P58513 81 aa-0.19□□□□□ -2.44
CPNE8-208ENST00000551855 PRO3102Q9H379 93 aa-0.19□□□□□ -2.44
CPNE8-208ENST00000551855 PTPN23Q9H3S7 1636 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 PCNX1Q96RV3 2341 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 SVEP1Q4LDE5 3571 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 ATP5EP2Q5VTU8 51 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 COX6B2Q6YFQ2 88 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 TRANK1O15050 2925 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 ABCA8O94911 1581 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 MAP1AP78559 2803 aaPredicted RBP-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 IQGAP3Q86VI3 1631 aa-0.2□□□□□ -2.44
CPNE8-208ENST00000551855 MYO5CQ9NQX4 1742 aa-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 ABCC1P33527 1531 aa-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 H0YAA0 97 aa-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 HMGA1P17096 107 aaKnown RBP-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 C18orf32Q8TCD1 76 aa-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 RRBP1Q9P2E9 1410 aaKnown RBP-0.21□□□□□ -2.44
CPNE8-208ENST00000551855 MAP3K1Q13233 1512 aa-0.22□□□□□ -2.44
CPNE8-208ENST00000551855 PKHD1P08F94 4074 aa-0.22□□□□□ -2.44
CPNE8-208ENST00000551855 PDE4DIPQ5VU43 2346 aa-0.22□□□□□ -2.44
CPNE8-208ENST00000551855 LCE6AA0A183 80 aa-0.22□□□□□ -2.44
CPNE8-208ENST00000551855 PARP4Q9UKK3 1724 aaKnown RBP-0.22□□□□□ -2.44
CPNE8-208ENST00000551855 PLXNC1O60486 1568 aa-0.23□□□□□ -2.45
CPNE8-208ENST00000551855 TNRC18O15417 2968 aaPredicted RBP-0.23□□□□□ -2.45
CPNE8-208ENST00000551855 FLGP20930 4061 aaPredicted RBP-0.23□□□□□ -2.45
CPNE8-208ENST00000551855 NRAPQ86VF7 1730 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms