RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 MYO18BQ8IUG5 2567 aa-0.47□□□□□ -2.48
NPAS3-208ENST00000550662 CRIPTQ9P021 101 aa-0.47□□□□□ -2.48
NPAS3-208ENST00000550662 NBEAQ8NFP9 2946 aa-0.47□□□□□ -2.48
NPAS3-208ENST00000550662 DNAH1Q9P2D7 4330 aa-0.47□□□□□ -2.49
NPAS3-208ENST00000550662 FASNP49327 2511 aaKnown RBP-0.47□□□□□ -2.49
NPAS3-208ENST00000550662 SACSQ9NZJ4 4579 aa-0.48□□□□□ -2.49
NPAS3-208ENST00000550662 I3L3M4 83 aa-0.48□□□□□ -2.49
NPAS3-208ENST00000550662 C9orf62Q8N4C0 152 aa-0.48□□□□□ -2.49
NPAS3-208ENST00000550662 PDE4DIPQ5VU43 2346 aa-0.48□□□□□ -2.49
NPAS3-208ENST00000550662 USP9XQ93008 2570 aaPredicted RBP-0.49□□□□□ -2.49
NPAS3-208ENST00000550662 LRRC37AA6NMS7 1700 aa-0.49□□□□□ -2.49
NPAS3-208ENST00000550662 MYO15AQ9UKN7 3530 aa-0.49□□□□□ -2.49
NPAS3-208ENST00000550662 H1FX-AS1Q4G0G2 97 aa-0.49□□□□□ -2.49
NPAS3-208ENST00000550662 MON2Q7Z3U7 1717 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 ANKRD11Q6UB99 2663 aaPredicted RBP-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 DYNC1H1Q14204 4646 aaKnown RBP-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 TEX15Q9BXT5 2789 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 CHD7Q9P2D1 2997 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 DMXL2Q8TDJ6 3036 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 CCL22O00626 93 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 ARMS2P0C7Q2 107 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 DEFB112Q30KQ8 113 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 KRTAP19-6Q3LI70 58 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 LELP1Q5T871 98 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 CUX1P39880 1505 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 ADAMTS12P58397 1594 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 DNAH8Q96JB1 4490 aa-0.5□□□□□ -2.49
NPAS3-208ENST00000550662 C5P01031 1676 aa-0.51□□□□□ -2.49
NPAS3-208ENST00000550662 COL14A1Q05707 1796 aaKnown RBP-0.51□□□□□ -2.49
NPAS3-208ENST00000550662 PTPN23Q9H3S7 1636 aa-0.51□□□□□ -2.49
NPAS3-208ENST00000550662 DMXL1Q9Y485 3027 aa-0.51□□□□□ -2.49
NPAS3-208ENST00000550662 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 NRXN1Q9ULB1 1477 aa-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 CMYA5Q8N3K9 4069 aa-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 GCN1Q92616 2671 aaKnown RBP-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 HMGN3Q15651 99 aa-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 MRPL34Q9BQ48 92 aaKnown RBP-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 SRCAPQ6ZRS2 3230 aa-0.52□□□□□ -2.49
NPAS3-208ENST00000550662 SAMD9Q5K651 1589 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 CLIP1P30622 1438 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 COL5A1-AS1Q5SY13 56 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 KIF20BQ96Q89 1820 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 BCORQ6W2J9 1755 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 QSER1Q2KHR3 1735 aa-0.53□□□□□ -2.49
NPAS3-208ENST00000550662 A0A0C4DFX4 3053 aa-0.53□□□□□ -2.5
NPAS3-208ENST00000550662 EYSQ5T1H1 3165 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 CRYBG1Q9Y4K1 1723 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 SPTY2D1-AS1A0A0U1RR47 76 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 KALRNO60229 2985 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 CDKN2A-AS1Q9UH64 79 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 MGAM2Q2M2H8 2515 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 DNAH5Q8TE73 4624 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 RELNP78509 3460 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 MYH4Q9Y623 1939 aa-0.54□□□□□ -2.5
NPAS3-208ENST00000550662 LRRK2Q5S007 2527 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 TRBV7-7A0A0K0K1E9 115 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 H0YGG7 62 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 M0R143 59 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 HEPN1Q6WQI6 88 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 SPRR2FQ96RM1 72 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 HIGD1BQ9P298 99 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 PKD1L3Q7Z443 1732 aa-0.55□□□□□ -2.5
NPAS3-208ENST00000550662 SMG1Q96Q15 3661 aaKnown RBP-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 SPENQ96T58 3664 aaKnown RBP-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 UQCRHLA0A096LP55 91 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 NCMAPQ5T1S8 102 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 ALKAL2Q6UX46 152 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 WFDC13Q8IUB5 93 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 UBR1Q8IWV7 1749 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 CICQ96RK0 1608 aaPredicted RBP-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 ALKQ9UM73 1620 aa-0.56□□□□□ -2.5
NPAS3-208ENST00000550662 FAM186AA6NE01 2351 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 RGPD1P0DJD0 1748 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 MT1AP04731 61 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 ZNF720Q7Z2F6 126 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 PSENENQ9NZ42 101 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 ZFHX4Q86UP3 3567 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 CFAP46Q8IYW2 2715 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 PREX1Q8TCU6 1659 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 TRIOO75962 3097 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 CSMD2Q7Z408 3487 aa-0.57□□□□□ -2.5
NPAS3-208ENST00000550662 C4AP0C0L4 1744 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 C4BP0C0L5 1744 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 CLTCQ00610 1675 aaKnown RBP-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 TRRAPQ9Y4A5 3859 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 FAUP35544 74 aaKnown RBP-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 ETDBQ3ZM63 59 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 DNAH17Q9UFH2 4485 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 TROQ12816 1431 aaPredicted RBP-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 VPS8Q8N3P4 1428 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 UTP20O75691 2785 aaKnown RBP-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 ANKRD26Q9UPS8 1709 aa-0.58□□□□□ -2.5
NPAS3-208ENST00000550662 MTORP42345 2549 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 ACACAQ13085 2346 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 CEP290O15078 2479 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 CCDC168Q8NDH2 2452 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 MAGI2Q86UL8 1455 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 NMSQ5H8A3 153 aa-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 COX6B2Q6YFQ2 88 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms