RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
NUP188-211ENST00000550219 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
NUP188-211ENST00000550219 NCR3O14931 201 aa8.14□□□□□ -1.11
NUP188-211ENST00000550219 IGLV6-57P01721 117 aa8.14□□□□□ -1.11
NUP188-211ENST00000550219 UBE2BP63146 152 aa8.14□□□□□ -1.11
NUP188-211ENST00000550219 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
NUP188-211ENST00000550219 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
NUP188-211ENST00000550219 IGLV1-50A0A075B6I6 118 aa8.13□□□□□ -1.11
NUP188-211ENST00000550219 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
NUP188-211ENST00000550219 FXYD2P54710 66 aa8.13□□□□□ -1.11
NUP188-211ENST00000550219 CTAG1AP78358 180 aa8.13□□□□□ -1.11
NUP188-211ENST00000550219 LINC00337Q8N6G1 96 aa8.13□□□□□ -1.11
NUP188-211ENST00000550219 DDTP30046 118 aa8.12□□□□□ -1.11
NUP188-211ENST00000550219 TRBV10-3A0A0K0K1G6 114 aa8.11□□□□□ -1.11
NUP188-211ENST00000550219 H0Y9J4 135 aa8.11□□□□□ -1.11
NUP188-211ENST00000550219 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
NUP188-211ENST00000550219 CFC1P0CG37 223 aa8.11□□□□□ -1.11
NUP188-211ENST00000550219 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 A6NJY4 79 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 KCNQ1DNQ9H478 68 aa8.1□□□□□ -1.11
NUP188-211ENST00000550219 A0A0B4J2C4 111 aa8.09□□□□□ -1.11
NUP188-211ENST00000550219 A0A1B0GWB2 263 aa8.09□□□□□ -1.11
NUP188-211ENST00000550219 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
NUP188-211ENST00000550219 M0R143 59 aa8.07□□□□□ -1.12
NUP188-211ENST00000550219 PRYO14603 147 aa8.07□□□□□ -1.12
NUP188-211ENST00000550219 SPRR1AP35321 89 aa8.07□□□□□ -1.12
NUP188-211ENST00000550219 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
NUP188-211ENST00000550219 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
NUP188-211ENST00000550219 A6NDN8 102 aa8.06□□□□□ -1.12
NUP188-211ENST00000550219 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
NUP188-211ENST00000550219 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
NUP188-211ENST00000550219 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
NUP188-211ENST00000550219 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
NUP188-211ENST00000550219 RAB37Q96AX2 223 aa8.04□□□□□ -1.12
NUP188-211ENST00000550219 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
NUP188-211ENST00000550219 BCE1O60756 84 aa8.03□□□□□ -1.12
NUP188-211ENST00000550219 RPL13AP40429 203 aaKnown RBP8.03□□□□□ -1.12
NUP188-211ENST00000550219 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
NUP188-211ENST00000550219 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
NUP188-211ENST00000550219 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
NUP188-211ENST00000550219 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
NUP188-211ENST00000550219 K7ERJ3 54 aa8.01□□□□□ -1.13
NUP188-211ENST00000550219 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
NUP188-211ENST00000550219 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
NUP188-211ENST00000550219 LPAP08519 4548 aa8□□□□□ -1.13
NUP188-211ENST00000550219 PRR4Q16378 134 aa8□□□□□ -1.13
NUP188-211ENST00000550219 TRBV7-6A0A0J9YX20 115 aa7.99□□□□□ -1.13
NUP188-211ENST00000550219 B5MCH6 92 aa7.99□□□□□ -1.13
NUP188-211ENST00000550219 ZNF861PO60384 105 aa7.99□□□□□ -1.13
NUP188-211ENST00000550219 C6orf99Q4VX62 202 aa7.99□□□□□ -1.13
NUP188-211ENST00000550219 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
NUP188-211ENST00000550219 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
NUP188-211ENST00000550219 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
NUP188-211ENST00000550219 H7C2G1 150 aa7.97□□□□□ -1.13
NUP188-211ENST00000550219 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
NUP188-211ENST00000550219 SNHG12Q9BXW3 62 aa7.97□□□□□ -1.13
NUP188-211ENST00000550219 TSPAN13O95857 204 aa7.96□□□□□ -1.14
NUP188-211ENST00000550219 UBE2AP49459 152 aa7.96□□□□□ -1.14
NUP188-211ENST00000550219 BATFQ16520 125 aa7.96□□□□□ -1.14
NUP188-211ENST00000550219 Q6ZRX8 168 aa7.96□□□□□ -1.14
NUP188-211ENST00000550219 COX7BP24311 80 aa7.95□□□□□ -1.14
NUP188-211ENST00000550219 PRLHP81277 87 aa7.95□□□□□ -1.14
NUP188-211ENST00000550219 Q9BRP9 147 aa7.94□□□□□ -1.14
NUP188-211ENST00000550219 VAMP3Q15836 100 aa7.93□□□□□ -1.14
NUP188-211ENST00000550219 Q1RN00 199 aa7.93□□□□□ -1.14
NUP188-211ENST00000550219 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
NUP188-211ENST00000550219 A0A087X002 238 aa7.92□□□□□ -1.14
NUP188-211ENST00000550219 TRIAP1O43715 76 aa7.92□□□□□ -1.14
NUP188-211ENST00000550219 H0YGX0 51 aa7.91□□□□□ -1.14
NUP188-211ENST00000550219 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
NUP188-211ENST00000550219 DHRS4-AS1Q9P1J3 65 aa7.91□□□□□ -1.14
NUP188-211ENST00000550219 TAX1BP3O14907 124 aa7.9□□□□□ -1.14
NUP188-211ENST00000550219 LINC00575Q6W349 94 aa7.9□□□□□ -1.14
NUP188-211ENST00000550219 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 CRYGAP11844 174 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 PSMB2P49721 201 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 COL5A1-AS1Q5SY13 56 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 HIGD2AQ9BW72 106 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
NUP188-211ENST00000550219 COX6CP09669 75 aa7.88□□□□□ -1.15
NUP188-211ENST00000550219 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
NUP188-211ENST00000550219 FAM218AQ96MZ4 157 aa7.87□□□□□ -1.15
NUP188-211ENST00000550219 A0A1B0GX51 115 aa7.86□□□□□ -1.15
NUP188-211ENST00000550219 hADV29S1A0JD25 119 aa7.85□□□□□ -1.15
NUP188-211ENST00000550219 SLC25A20O43772 301 aa7.85□□□□□ -1.15
NUP188-211ENST00000550219 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
NUP188-211ENST00000550219 H3BUT2 72 aa7.84□□□□□ -1.15
NUP188-211ENST00000550219 SCGB1C2P0DMR2 95 aa7.84□□□□□ -1.15
NUP188-211ENST00000550219 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
NUP188-211ENST00000550219 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
NUP188-211ENST00000550219 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
NUP188-211ENST00000550219 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
NUP188-211ENST00000550219 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
NUP188-211ENST00000550219 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
NUP188-211ENST00000550219 LST1O00453 97 aa7.82□□□□□ -1.16
NUP188-211ENST00000550219 LINC00483Q53H64 154 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms