RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 ABCA4P78363 2273 aa1.89□□□□□ -2.11
PRDM4-204ENST00000549416 RP1P56715 2156 aa1.89□□□□□ -2.11
PRDM4-204ENST00000549416 GVQW2A0A096LPI5 108 aaPredicted RBP1.89□□□□□ -2.11
PRDM4-204ENST00000549416 CPSF4LA6NMK7 179 aaKnown RBP1.89□□□□□ -2.11
PRDM4-204ENST00000549416 NDUFA3O95167 84 aa1.89□□□□□ -2.11
PRDM4-204ENST00000549416 MKI67P46013 3256 aaKnown RBP1.88□□□□□ -2.11
PRDM4-204ENST00000549416 LAMA2P24043 3122 aaKnown RBP1.88□□□□□ -2.11
PRDM4-204ENST00000549416 A0A096LNT2 108 aa1.88□□□□□ -2.11
PRDM4-204ENST00000549416 DOCK10Q96BY6 2186 aa1.88□□□□□ -2.11
PRDM4-204ENST00000549416 MDC1Q14676 2089 aaKnown RBP1.87□□□□□ -2.11
PRDM4-204ENST00000549416 RANBP2P49792 3224 aaKnown RBP1.87□□□□□ -2.11
PRDM4-204ENST00000549416 SPINK13Q1W4C9 94 aa1.87□□□□□ -2.11
PRDM4-204ENST00000549416 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
PRDM4-204ENST00000549416 LAMA3Q16787 3333 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 CHD9Q3L8U1 2897 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 ANGP03950 147 aaKnown RBP1.86□□□□□ -2.11
PRDM4-204ENST00000549416 LINC00575Q6W349 94 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 CHD7Q9P2D1 2997 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 U3KQA8 63 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
PRDM4-204ENST00000549416 F5P12259 2224 aa1.85□□□□□ -2.11
PRDM4-204ENST00000549416 ZFHX3Q15911 3703 aa1.84□□□□□ -2.11
PRDM4-204ENST00000549416 CDH23Q9H251 3354 aa1.84□□□□□ -2.11
PRDM4-204ENST00000549416 NCOA6Q14686 2063 aaPredicted RBP1.84□□□□□ -2.11
PRDM4-204ENST00000549416 ZDBF2Q9HCK1 2354 aa1.84□□□□□ -2.12
PRDM4-204ENST00000549416 TTC28Q96AY4 2481 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 SORL1Q92673 2214 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 CACNA1GO43497 2377 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 J3QKU1 62 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 XIRP2A4UGR9 3374 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 REV3LO60673 3130 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 C5orf42Q9H799 3197 aa1.83□□□□□ -2.12
PRDM4-204ENST00000549416 UNQ6190/PRO20217Q6UXQ8 127 aa1.82□□□□□ -2.12
PRDM4-204ENST00000549416 PTPRZ1P23471 2315 aaPredicted RBP1.82□□□□□ -2.12
PRDM4-204ENST00000549416 SZT2Q5T011 3432 aa1.81□□□□□ -2.12
PRDM4-204ENST00000549416 RPL37P61927 97 aaKnown RBP1.81□□□□□ -2.12
PRDM4-204ENST00000549416 UBE2DNLQ8IWF7 75 aa1.81□□□□□ -2.12
PRDM4-204ENST00000549416 TECTAO75443 2155 aa1.81□□□□□ -2.12
PRDM4-204ENST00000549416 ALPK2Q86TB3 2170 aa1.81□□□□□ -2.12
PRDM4-204ENST00000549416 WDR87Q6ZQQ6 2873 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 PRB1P04280 392 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 LINC00158P58513 81 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 TTTY10Q9BZA0 68 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 PRUNE2Q8WUY3 3088 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 MUC6Q6W4X9 2439 aa1.8□□□□□ -2.12
PRDM4-204ENST00000549416 CACNA1HO95180 2353 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 BAHCC1Q9P281 2608 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 TNRC18O15417 2968 aaPredicted RBP1.79□□□□□ -2.12
PRDM4-204ENST00000549416 A0A0C4DFX4 3053 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 EYSQ5T1H1 3165 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 UNC80Q8N2C7 3258 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 Q8IZM0 81 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 EP300Q09472 2414 aaPredicted RBP1.79□□□□□ -2.12
PRDM4-204ENST00000549416 PIEZO1Q92508 2521 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 BDP1A6H8Y1 2624 aa1.79□□□□□ -2.12
PRDM4-204ENST00000549416 LAMA1P25391 3075 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 ICE1Q9Y2F5 2266 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 CRIP1P50238 77 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 SMIM2Q9BVW6 85 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 CRIPTQ9P021 101 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 SPTBN5Q9NRC6 3674 aaKnown RBP1.78□□□□□ -2.12
PRDM4-204ENST00000549416 NCOR1O75376 2440 aa1.78□□□□□ -2.12
PRDM4-204ENST00000549416 OTOGLQ3ZCN5 2332 aa1.78□□□□□ -2.13
PRDM4-204ENST00000549416 CDKN2A-AS1Q9UH64 79 aa1.77□□□□□ -2.13
PRDM4-204ENST00000549416 RIF1Q5UIP0 2472 aaKnown RBP1.77□□□□□ -2.13
PRDM4-204ENST00000549416 COL6A3P12111 3177 aa1.77□□□□□ -2.13
PRDM4-204ENST00000549416 MYO15AQ9UKN7 3530 aa1.77□□□□□ -2.13
PRDM4-204ENST00000549416 GVINP1Q7Z2Y8 2422 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 FAM186AA6NE01 2351 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 H3BSH0 61 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 LINC01590Q5TEZ4 76 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 LINC00308Q8TCZ7 52 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 USMG5Q96IX5 58 aa1.76□□□□□ -2.13
PRDM4-204ENST00000549416 TRIOO75962 3097 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 FRYLO94915 3013 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 VCANP13611 3396 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 SPTA1P02549 2419 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 NDUFA1O15239 70 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 RPS27P42677 84 aaKnown RBP1.75□□□□□ -2.13
PRDM4-204ENST00000549416 DEFB108BQ8NET1 73 aa1.75□□□□□ -2.13
PRDM4-204ENST00000549416 CACNA1EQ15878 2313 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 MED13LQ71F56 2210 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 NCOR2Q9Y618 2525 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 DNAH14Q0VDD8 3507 aa1.74□□□□□ -2.13
PRDM4-204ENST00000549416 FN1P02751 2386 aaKnown RBP1.73□□□□□ -2.13
PRDM4-204ENST00000549416 K7EQZ3 153 aa1.73□□□□□ -2.13
PRDM4-204ENST00000549416 MRPL34Q9BQ48 92 aaKnown RBP1.73□□□□□ -2.13
PRDM4-204ENST00000549416 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
PRDM4-204ENST00000549416 TP53AIP1Q9HCN2 124 aa1.73□□□□□ -2.13
PRDM4-204ENST00000549416 CFAP54Q96N23 3096 aa1.73□□□□□ -2.13
PRDM4-204ENST00000549416 URB1O60287 2271 aaKnown RBP1.73□□□□□ -2.13
PRDM4-204ENST00000549416 GOLGA4Q13439 2230 aaKnown RBP1.72□□□□□ -2.13
PRDM4-204ENST00000549416 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 KNL1Q8NG31 2342 aa1.72□□□□□ -2.13
PRDM4-204ENST00000549416 AHCTF1Q8WYP5 2266 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms