RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 UQCRHP07919 91 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 S100A10P60903 97 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 ACBD7Q8N6N7 88 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 AP4S1Q9Y587 144 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 SRCAPQ6ZRS2 3230 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 FYCO1Q9BQS8 1478 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 ABCC2Q92887 1545 aa-0.48□□□□□ -2.49
RPAP3-206ENST00000548296 LRRC37AA6NMS7 1700 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 DEFB107AQ8IZN7 70 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 SERP2Q8N6R1 65 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 CNTLNQ9NXG0 1405 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 ANK3Q12955 4377 aaKnown RBP-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 NKTRP30414 1462 aaKnown RBP-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 RAPGEF2Q9Y4G8 1499 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 CEP290O15078 2479 aa-0.49□□□□□ -2.49
RPAP3-206ENST00000548296 DNAH9Q9NYC9 4486 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 CPSF4LA6NMK7 179 aaKnown RBP-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 LINC00032P0C843 101 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 CRIPTQ9P021 101 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 SLIT1O75093 1534 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 PKHD1L1Q86WI1 4243 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 VPS13DQ5THJ4 4388 aa-0.5□□□□□ -2.49
RPAP3-206ENST00000548296 SACSQ9NZJ4 4579 aa-0.51□□□□□ -2.49
RPAP3-206ENST00000548296 DNAH3Q8TD57 4116 aa-0.51□□□□□ -2.49
RPAP3-206ENST00000548296 EP400Q96L91 3159 aa-0.51□□□□□ -2.49
RPAP3-206ENST00000548296 DNAH1Q9P2D7 4330 aa-0.51□□□□□ -2.49
RPAP3-206ENST00000548296 MON2Q7Z3U7 1717 aa-0.52□□□□□ -2.49
RPAP3-206ENST00000548296 ARMS2P0C7Q2 107 aa-0.52□□□□□ -2.49
RPAP3-206ENST00000548296 DPY30Q9C005 99 aa-0.52□□□□□ -2.49
RPAP3-206ENST00000548296 APLNQ9ULZ1 77 aa-0.52□□□□□ -2.49
RPAP3-206ENST00000548296 NRXN1Q9ULB1 1477 aa-0.53□□□□□ -2.49
RPAP3-206ENST00000548296 GNGT1P63211 74 aa-0.53□□□□□ -2.49
RPAP3-206ENST00000548296 PDE4DIPQ5VU43 2346 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 VPS13BQ7Z7G8 4022 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 RGPD2P0DJD1 1756 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 COL14A1Q05707 1796 aaKnown RBP-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 C5P01031 1676 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 LRBAP50851 2863 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 BOD1L1Q8NFC6 3051 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 CMYA5Q8N3K9 4069 aa-0.54□□□□□ -2.5
RPAP3-206ENST00000548296 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 I3L3M4 83 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 HMGN3Q15651 99 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 DEFB135Q30KP9 77 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 CHD7Q9P2D1 2997 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 REV3LO60673 3130 aa-0.55□□□□□ -2.5
RPAP3-206ENST00000548296 ZFHX4Q86UP3 3567 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 MGAQ8IWI9 3026 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 LOC400499M0QZD8 3231 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 DNAH11Q96DT5 4516 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 AKAP9Q99996 3911 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 CSMD1Q96PZ7 3565 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 ALKAL2Q6UX46 152 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 CSMD2Q7Z408 3487 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 ZZEF1O43149 2961 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 PTPN23Q9H3S7 1636 aa-0.56□□□□□ -2.5
RPAP3-206ENST00000548296 ADAMTS12P58397 1594 aa-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 SAMD9Q5K651 1589 aa-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 CLTCQ00610 1675 aaKnown RBP-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 DNAH17Q9UFH2 4485 aa-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 KIF20BQ96Q89 1820 aa-0.57□□□□□ -2.5
RPAP3-206ENST00000548296 HTTP42858 3142 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 EYSQ5T1H1 3165 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 TRBV7-7A0A0K0K1E9 115 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 DEFB112Q30KQ8 113 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 H1FX-AS1Q4G0G2 97 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 SPEGQ15772 3267 aa-0.58□□□□□ -2.5
RPAP3-206ENST00000548296 EPRSP07814 1512 aaKnown RBP-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 CRYBG3Q68DQ2 2970 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 BCORQ6W2J9 1755 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 MT1AP04731 61 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 COL5A1-AS1Q5SY13 56 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 NCMAPQ5T1S8 102 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 C9orf62Q8N4C0 152 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 VPS8Q8N3P4 1428 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 CRYBG1Q9Y4K1 1723 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 SPENQ96T58 3664 aaKnown RBP-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 CUX1P39880 1505 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 CENPEQ02224 2701 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 FREM2Q5SZK8 3169 aa-0.59□□□□□ -2.5
RPAP3-206ENST00000548296 MYH4Q9Y623 1939 aa-0.6□□□□□ -2.5
RPAP3-206ENST00000548296 TRIOO75962 3097 aa-0.6□□□□□ -2.51
RPAP3-206ENST00000548296 M0R143 59 aa-0.6□□□□□ -2.51
RPAP3-206ENST00000548296 ETDBQ3ZM63 59 aa-0.6□□□□□ -2.51
RPAP3-206ENST00000548296 MRPL34Q9BQ48 92 aaKnown RBP-0.6□□□□□ -2.51
RPAP3-206ENST00000548296 CFAP54Q96N23 3096 aa-0.6□□□□□ -2.51
RPAP3-206ENST00000548296 DNAH8Q96JB1 4490 aa-0.61□□□□□ -2.51
RPAP3-206ENST00000548296 UQCRHLA0A096LP55 91 aa-0.61□□□□□ -2.51
RPAP3-206ENST00000548296 ZNF720Q7Z2F6 126 aa-0.61□□□□□ -2.51
RPAP3-206ENST00000548296 ANKRD26Q9UPS8 1709 aa-0.61□□□□□ -2.51
RPAP3-206ENST00000548296 FANCAO15360 1455 aa-0.61□□□□□ -2.51
RPAP3-206ENST00000548296 TRRAPQ9Y4A5 3859 aa-0.62□□□□□ -2.51
RPAP3-206ENST00000548296 SMG1Q96Q15 3661 aaKnown RBP-0.62□□□□□ -2.51
RPAP3-206ENST00000548296 ADGRG4Q8IZF6 3080 aa-0.62□□□□□ -2.51
RPAP3-206ENST00000548296 FAUP35544 74 aaKnown RBP-0.62□□□□□ -2.51
RPAP3-206ENST00000548296 PSENENQ9NZ42 101 aa-0.62□□□□□ -2.51
RPAP3-206ENST00000548296 DMXL1Q9Y485 3027 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms