RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 DEFB104AQ8WTQ1 72 aa1.01□□□□□ -2.25
CFTR-207ENST00000546407 CEP192Q8TEP8 1941 aa1.01□□□□□ -2.25
CFTR-207ENST00000546407 TPRP12270 2363 aaKnown RBP1□□□□□ -2.25
CFTR-207ENST00000546407 CACNA1EQ15878 2313 aa1□□□□□ -2.25
CFTR-207ENST00000546407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1□□□□□ -2.25
CFTR-207ENST00000546407 AHCTF1Q8WYP5 2266 aa1□□□□□ -2.25
CFTR-207ENST00000546407 WNK2Q9Y3S1 2297 aa1□□□□□ -2.25
CFTR-207ENST00000546407 DEFB130BP0DP73 79 aa1□□□□□ -2.25
CFTR-207ENST00000546407 DEFB130AP0DP74 79 aa1□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP10-8P60410 259 aa1□□□□□ -2.25
CFTR-207ENST00000546407 BRD3OSQ6XYD6 125 aa1□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP9-8Q9BYQ0 159 aa1□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP4-11Q9BYQ6 195 aa1□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP4-5Q9BYR2 181 aa1□□□□□ -2.25
CFTR-207ENST00000546407 ADAMTS9Q9P2N4 1935 aa0.99□□□□□ -2.25
CFTR-207ENST00000546407 KNL1Q8NG31 2342 aa0.99□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP7-1Q8IUC3 87 aa0.99□□□□□ -2.25
CFTR-207ENST00000546407 RTTNQ86VV8 2226 aa0.99□□□□□ -2.25
CFTR-207ENST00000546407 COL4A2P08572 1712 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 K7EIL1 84 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 SPRR1AP35321 89 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP19-4Q3LI73 84 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 KRTAP13-2Q52LG2 175 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 DEFB119Q8N690 84 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 DEFB105AQ8NG35 78 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 USF3Q68DE3 2245 aa0.98□□□□□ -2.25
CFTR-207ENST00000546407 ZFHX2Q9C0A1 2572 aaPredicted RBP0.98□□□□□ -2.25
CFTR-207ENST00000546407 ASXL3Q9C0F0 2248 aa0.97□□□□□ -2.25
CFTR-207ENST00000546407 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
CFTR-207ENST00000546407 SPRR1BP22528 89 aa0.97□□□□□ -2.25
CFTR-207ENST00000546407 ASCC3Q8N3C0 2202 aaKnown RBP0.97□□□□□ -2.25
CFTR-207ENST00000546407 CACNA1BQ00975 2339 aa0.97□□□□□ -2.25
CFTR-207ENST00000546407 URB1O60287 2271 aaKnown RBP0.96□□□□□ -2.26
CFTR-207ENST00000546407 TECTAO75443 2155 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 CNOT1A5YKK6 2376 aaKnown RBP0.96□□□□□ -2.26
CFTR-207ENST00000546407 TRIOBPQ9H2D6 2365 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 SPRR5A0A1B0GTR4 108 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 PTPRQQ9UMZ3 2332 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 ICE1Q9Y2F5 2266 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 ATRXP46100 2492 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 ALMS1Q8TCU4 4167 aa0.96□□□□□ -2.26
CFTR-207ENST00000546407 H3BUX3 64 aa0.95□□□□□ -2.26
CFTR-207ENST00000546407 APELAP0DMC3 54 aa0.95□□□□□ -2.26
CFTR-207ENST00000546407 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
CFTR-207ENST00000546407 DOPEY2Q9Y3R5 2298 aa0.95□□□□□ -2.26
CFTR-207ENST00000546407 ABCA1O95477 2261 aa0.94□□□□□ -2.26
CFTR-207ENST00000546407 A0A1B0GVY2 172 aa0.94□□□□□ -2.26
CFTR-207ENST00000546407 LELP1Q5T871 98 aa0.94□□□□□ -2.26
CFTR-207ENST00000546407 NOP10Q9NPE3 64 aaKnown RBP0.94□□□□□ -2.26
CFTR-207ENST00000546407 BPTFQ12830 3046 aa0.93□□□□□ -2.26
CFTR-207ENST00000546407 PRLHP81277 87 aa0.93□□□□□ -2.26
CFTR-207ENST00000546407 Q5VSD8 79 aa0.93□□□□□ -2.26
CFTR-207ENST00000546407 DEFB110Q30KQ9 67 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 KRTAP13-4Q3LI77 160 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 LCE5AQ5TCM9 118 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 DEFB108BQ8NET1 73 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 KRTAP2-2Q9BYT5 123 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 APLNQ9ULZ1 77 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 S4R3F8 94 aa0.92□□□□□ -2.26
CFTR-207ENST00000546407 FN1P02751 2386 aaKnown RBP0.92□□□□□ -2.26
CFTR-207ENST00000546407 WNK1Q9H4A3 2382 aa0.91□□□□□ -2.26
CFTR-207ENST00000546407 OTOGLQ3ZCN5 2332 aa0.91□□□□□ -2.26
CFTR-207ENST00000546407 KRTAP1-4P0C5Y4 121 aa0.91□□□□□ -2.26
CFTR-207ENST00000546407 DEFB1P60022 68 aa0.91□□□□□ -2.26
CFTR-207ENST00000546407 KRTAP10-9P60411 292 aa0.91□□□□□ -2.26
CFTR-207ENST00000546407 FAM208BQ5VWN6 2430 aa0.9□□□□□ -2.26
CFTR-207ENST00000546407 PRO0255Q9UI72 69 aa0.9□□□□□ -2.27
CFTR-207ENST00000546407 Q9Y3F1 56 aa0.9□□□□□ -2.27
CFTR-207ENST00000546407 COL27A1Q8IZC6 1860 aaPredicted RBP0.89□□□□□ -2.27
CFTR-207ENST00000546407 SPINK1P00995 79 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 HTN1P15515 57 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 MT3P25713 68 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP10-11P60412 298 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 JMJD1CQ15652 2540 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 PCNX1Q96RV3 2341 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 CACNA1GO43497 2377 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 CACNA1HO95180 2353 aa0.89□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP10-2P60368 255 aa0.88□□□□□ -2.27
CFTR-207ENST00000546407 M0QZ58 72 aa0.87□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP12-1P59990 96 aa0.87□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP10-6P60371 365 aaPredicted RBP0.87□□□□□ -2.27
CFTR-207ENST00000546407 LCE4AQ5TA78 99 aa0.87□□□□□ -2.27
CFTR-207ENST00000546407 SPTBN2O15020 2390 aa0.87□□□□□ -2.27
CFTR-207ENST00000546407 ZDBF2Q9HCK1 2354 aa0.87□□□□□ -2.27
CFTR-207ENST00000546407 PIEZO2Q9H5I5 2752 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 COL6A6A6NMZ7 2263 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 IGF2RP11717 2491 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 A0A0D9SG42 100 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 CD52P31358 61 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 DEFB103AP81534 67 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 PKDREJQ9NTG1 2253 aa0.86□□□□□ -2.27
CFTR-207ENST00000546407 NAV3Q8IVL0 2385 aa0.85□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP9-3Q9BYQ3 159 aa0.85□□□□□ -2.27
CFTR-207ENST00000546407 SPTA1P02549 2419 aa0.85□□□□□ -2.27
CFTR-207ENST00000546407 CEP250Q9BV73 2442 aa0.85□□□□□ -2.27
CFTR-207ENST00000546407 ROS1P08922 2347 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 PTPRZ1P23471 2315 aaPredicted RBP0.84□□□□□ -2.27
CFTR-207ENST00000546407 NCOR1O75376 2440 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms