RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	NDUFC2-KCTD14	E9PQ53	114 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	PSCA	O43653	123 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	ANG	P03950	147 aa	Known RBP	4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	CFC1B	P0CG36	223 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	CFC1	P0CG37	223 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	COX7C	P15954	63 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	FXYD2	P54710	66 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	MIA	Q16674	131 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	C4orf26	Q17RF5	130 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	KRTAP20-1	Q3LI63	56 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	CDC42SE2	Q9NRR3	84 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	PRR34	Q9NV39	138 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	TP73-AS1	Q9UF72	201 aa		4.28	□□□□□ -1.72
LDHA-223	ENST00000545215	IGIP	A6NJ69	53 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	ATOX1	O00244	68 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	IGHV3-30	P01768	117 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	IGHV3-33	P01772	117 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	IGHV3-30-3	P0DP02	117 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	IGHV3-30-5	P0DP03	117 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	REG3A	Q06141	175 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215		Q5XG85	94 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215		Q8N814	137 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	DPH3	Q96FX2	82 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	SCGB3A1	Q96QR1	104 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	OCR1	Q9BZK8	76 aa		4.27	□□□□□ -1.73
LDHA-223	ENST00000545215	IGLV4-3	A0A075B6K6	122 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	TRAV13-1	A0A0B4J241	112 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215		J3QQQ9	107 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	ACYP1	P07311	99 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	PFN2	P35080	140 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	RPL13A	P40429	203 aa	Known RBP	4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	RPL39	P62891	51 aa	Known RBP	4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	SS18	Q15532	418 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	TMEM170B	Q5T4T1	132 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	LINC00269	Q8N2A0	174 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	UBE2W	Q96B02	151 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	CARD19	Q96LW7	228 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	LAMTOR3	Q9UHA4	124 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	KLK12	Q9UKR0	248 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	PKIG	Q9Y2B9	76 aa		4.26	□□□□□ -1.73
LDHA-223	ENST00000545215	IGLV4-60	A0A075B6I1	120 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215	IGLV7-46	A0A075B6I9	117 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM236A	A0A1B0GUQ0	79 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM236B	A0A1B0GV22	79 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215	CXCL5	P42830	114 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215	CD164	Q04900	197 aa		4.25	□□□□□ -1.73
LDHA-223	ENST00000545215		A0A096LNJ9	63 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	MYMX	A0A1B0GTQ4	84 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	LINC00959	A0A1B0GUT2	108 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215		K7ERJ3	54 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	IGKC	P01834	107 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	PSMB2	P49721	201 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	ENHO	Q6UWT2	76 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	LINC01561	Q8N1V8	128 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215		Q8NBF4	154 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	IFI27L1	Q96BM0	104 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	AMELX	Q99217	191 aa		4.24	□□□□□ -1.73
LDHA-223	ENST00000545215	IGKV2D-24	A0A075B6R9	120 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	TRAV12-1	A0A0B4J245	112 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM236D	A0A1B0GTK5	79 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM236C	P0DP71	79 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM19A3	Q7Z5A8	133 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	HIST1H4G	Q99525	98 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215	USH2A	O75445	5202 aa		4.23	□□□□□ -1.73
LDHA-223	ENST00000545215		A0A087WYN8	130 aa		4.22	□□□□□ -1.73
LDHA-223	ENST00000545215	SLC25A20	O43772	301 aa		4.22	□□□□□ -1.73
LDHA-223	ENST00000545215	UBE2D1	P51668	147 aa		4.22	□□□□□ -1.73
LDHA-223	ENST00000545215	C14orf177	Q52M58	125 aa		4.22	□□□□□ -1.73
LDHA-223	ENST00000545215	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.22	□□□□□ -1.73
LDHA-223	ENST00000545215	IGKV3OR2-268	A0A0C4DH90	116 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	LOC107984156	A0A0G2JMH3	177 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	COX7A2L	O14548	114 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	LECT2	O14960	151 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	PLN	P26678	52 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	NPC2	P61916	151 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	CLPSL2	Q6UWE3	100 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	LINC00173	Q6ZV60	143 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM19A1	Q7Z5A9	133 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	ARL17A	Q8IVW1	177 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	FAM104A	Q969W3	186 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	OPRPN	Q99935	248 aa	Predicted RBP	4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	SERP1	Q9Y6X1	66 aa		4.21	□□□□□ -1.73
LDHA-223	ENST00000545215	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	RPL37AP8	A6NKH3	93 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215		F8VRH5	84 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	XCL1	P47992	114 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	PMAIP1	Q13794	54 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	KRTAP6-3	Q3LI67	103 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	PCP2	Q8IVA1	136 aa		4.21	□□□□□ -1.74
LDHA-223	ENST00000545215	MACF1	Q9UPN3	7388 aa	Known RBP	4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	IGLV10-54	A0A075B6I4	117 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	SMIM26	A0A096LP01	95 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	IGHV1-58	A0A0C4DH39	117 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215		H3BT86	120 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	ATXN8	Q156A1	80 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	RNASE13	Q5GAN3	156 aa	Known RBP	4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	KRTAP26-1	Q6PEX3	210 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	LINC00643	Q86TS7	51 aa		4.2	□□□□□ -1.74
LDHA-223	ENST00000545215	SFTA2	Q6UW10	78 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms