RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	FAM107B	Q9H098	131 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	TLN2	Q9Y4G6	2542 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	AP4S1	Q9Y587	144 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	COL6A5	A8TX70	2615 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	TARBP1	Q13395	1621 aa	Known RBP	-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	EYS	Q5T1H1	3165 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	S100A12	P80511	92 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	PRLH	P81277	87 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	TSC22D3	Q99576	134 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	CGREF1	Q99674	301 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	UBE2D4	Q9Y2X8	147 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	CFAP46	Q8IYW2	2715 aa		-1.03	□□□□□ -2.57
RAP1B-231	ENST00000544639	SNAPC5	O75971	98 aa		-1.04	□□□□□ -2.58
RAP1B-231	ENST00000544639	C1orf54	Q8WWF1	131 aa		-1.04	□□□□□ -2.58
RAP1B-231	ENST00000544639	PREX1	Q8TCU6	1659 aa		-1.04	□□□□□ -2.58
RAP1B-231	ENST00000544639	SAMD9	Q5K651	1589 aa		-1.04	□□□□□ -2.58
RAP1B-231	ENST00000544639	TCHH	Q07283	1943 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	SPEN	Q96T58	3664 aa	Known RBP	-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	C4A	P0C0L4	1744 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	C4B	P0C0L5	1744 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	TMEM218	A2RU14	115 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	IGLC2	P0DOY2	106 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	IGLC3	P0DOY3	106 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	KRTDAP	P60985	99 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	RPL38	P63173	70 aa	Known RBP	-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	PMCHL1	Q16048	86 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	SVBP	Q8N300	66 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	MT1L	Q93083	61 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	CACFD1	Q9UGQ2	172 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	SHPRH	Q149N8	1683 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	PLXNC1	O60486	1568 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	PDCD11	Q14690	1871 aa	Known RBP	-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	MAGI2	Q86UL8	1455 aa		-1.05	□□□□□ -2.58
RAP1B-231	ENST00000544639	LRBA	P50851	2863 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	SRCAP	Q6ZRS2	3230 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	DYNC2H1	Q8NCM8	4307 aa	Known RBP	-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	TRBV25-1	A0A075B6N4	114 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	SMR3B	P02814	79 aa	Predicted RBP	-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	COX7B	P24311	80 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	LINC00158	P58513	81 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	PRO3102	Q9H379	93 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	RGPD8	O14715	1765 aa	Predicted RBP	-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	RGPD5	Q99666	1765 aa		-1.06	□□□□□ -2.58
RAP1B-231	ENST00000544639	TOPAZ1	Q8N9V7	1692 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	DNAH17	Q9UFH2	4485 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	hADV29S1	A0JD25	119 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	UQCRH	P07919	91 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	DEFB106A	Q8N104	65 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	IER3IP1	Q9Y5U9	82 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	ARHGAP5	Q13017	1502 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	FAM135A	Q9P2D6	1515 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	RGPD2	P0DJD1	1756 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	BPTF	Q12830	3046 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	LRRC9	Q6ZRR7	1453 aa		-1.07	□□□□□ -2.58
RAP1B-231	ENST00000544639	SPTAN1	Q13813	2472 aa	Known RBP	-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	MON2	Q7Z3U7	1717 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	HMGN1	P05114	100 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	C3orf79	P0CE67	100 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	CLPSL2	Q6UWE3	100 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	MT1M	Q8N339	61 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	SERP2	Q8N6R1	65 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	MYOM2	P54296	1465 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	C5	P01031	1676 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	CUL7	Q14999	1698 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	TRRAP	Q9Y4A5	3859 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	SCN11A	Q9UI33	1791 aa		-1.08	□□□□□ -2.58
RAP1B-231	ENST00000544639	QSER1	Q2KHR3	1735 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	WIZ	O95785	1651 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	ABCC10	Q5T3U5	1492 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639		D6R8Y8	96 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639		H3BQ15	152 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	LEPROTL1	O95214	131 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	MT2A	P02795	61 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	KRTAP8-1	Q8IUC2	63 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	MUSTN1	Q8IVN3	82 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	DNAH10	Q8IVF4	4471 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	ANKRD36	A6QL64	1941 aa		-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	SPTBN5	Q9NRC6	3674 aa	Known RBP	-1.09	□□□□□ -2.58
RAP1B-231	ENST00000544639	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-1.1	□□□□□ -2.58
RAP1B-231	ENST00000544639		A0A1B0GV90	55 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	NDUFC1	O43677	76 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	RPL13AP3	Q6NVV1	102 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	GAFA1	Q96PS6	74 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	TRGV9	Q99603	122 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	DNAH5	Q8TE73	4624 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	ABCC2	Q92887	1545 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	LRRC7	Q96NW7	1537 aa		-1.1	□□□□□ -2.59
RAP1B-231	ENST00000544639	DEPDC5	O75140	1603 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	USP32	Q8NFA0	1604 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	MLH3	Q9UHC1	1453 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	RAPGEF2	Q9Y4G8	1499 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	CDC42BPA	Q5VT25	1732 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	GNGT2	O14610	69 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	MT1B	P07438	61 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	DEFB130B	P0DP73	79 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	DEFB130A	P0DP74	79 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	PPP3R1	P63098	170 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	ETDB	Q3ZM63	59 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	ALKAL2	Q6UX46	152 aa		-1.11	□□□□□ -2.59
RAP1B-231	ENST00000544639	CC2D2A	Q9P2K1	1620 aa		-1.11	□□□□□ -2.59

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