RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 Q75L30 129 aa7.53□□□□□ -1.2
CDH3-203ENST00000542274 LINC00467Q9BRT7 94 aa7.53□□□□□ -1.2
CDH3-203ENST00000542274 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
CDH3-203ENST00000542274 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
CDH3-203ENST00000542274 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
CDH3-203ENST00000542274 PRR4Q16378 134 aa7.52□□□□□ -1.21
CDH3-203ENST00000542274 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
CDH3-203ENST00000542274 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
CDH3-203ENST00000542274 M0R2N4 97 aa7.51□□□□□ -1.21
CDH3-203ENST00000542274 REG3AQ06141 175 aa7.5□□□□□ -1.21
CDH3-203ENST00000542274 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
CDH3-203ENST00000542274 CSNK1G2-AS1Q8NCQ2 148 aa7.5□□□□□ -1.21
CDH3-203ENST00000542274 Q6ZQT0 140 aa7.49□□□□□ -1.21
CDH3-203ENST00000542274 ANK2Q01484 3957 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 RETNLBQ9BQ08 111 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
CDH3-203ENST00000542274 TRGV2A0A075B6R0 118 aa7.47□□□□□ -1.21
CDH3-203ENST00000542274 CELA1Q9UNI1 258 aa7.47□□□□□ -1.21
CDH3-203ENST00000542274 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.21
CDH3-203ENST00000542274 K7EQD1 137 aa7.46□□□□□ -1.21
CDH3-203ENST00000542274 DEFB4AO15263 64 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 COX6A2Q02221 97 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 NOTCH1P46531 2555 aa7.45□□□□□ -1.22
CDH3-203ENST00000542274 CMC4P56277 68 aaPredicted RBP7.44□□□□□ -1.22
CDH3-203ENST00000542274 C16orf74Q96GX8 76 aa7.44□□□□□ -1.22
CDH3-203ENST00000542274 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
CDH3-203ENST00000542274 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
CDH3-203ENST00000542274 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
CDH3-203ENST00000542274 LINC00476Q8WZB0 136 aa7.43□□□□□ -1.22
CDH3-203ENST00000542274 SND1-IT1Q9HBX3 110 aa7.43□□□□□ -1.22
CDH3-203ENST00000542274 Q8N9L7 120 aa7.43□□□□□ -1.22
CDH3-203ENST00000542274 LOC110117498A0A087WWA1 95 aa7.42□□□□□ -1.22
CDH3-203ENST00000542274 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CDH3-203ENST00000542274 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
CDH3-203ENST00000542274 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
CDH3-203ENST00000542274 A0A096LPF7 62 aa7.41□□□□□ -1.22
CDH3-203ENST00000542274 IGKV3OR2-268A0A0C4DH90 116 aa7.41□□□□□ -1.22
CDH3-203ENST00000542274 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
CDH3-203ENST00000542274 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
CDH3-203ENST00000542274 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
CDH3-203ENST00000542274 ZCCHC13Q8WW36 166 aaKnown RBP7.4□□□□□ -1.22
CDH3-203ENST00000542274 FAM30AQ9NZY2 134 aa7.4□□□□□ -1.22
CDH3-203ENST00000542274 X6R8D5 127 aa7.4□□□□□ -1.22
CDH3-203ENST00000542274 Q8N814 137 aa7.4□□□□□ -1.23
CDH3-203ENST00000542274 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
CDH3-203ENST00000542274 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
CDH3-203ENST00000542274 KRTAP10-11P60412 298 aa7.38□□□□□ -1.23
CDH3-203ENST00000542274 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
CDH3-203ENST00000542274 LCE6AA0A183 80 aa7.38□□□□□ -1.23
CDH3-203ENST00000542274 NBEAL1Q6ZS30 2694 aa7.38□□□□□ -1.23
CDH3-203ENST00000542274 IGLV4-60A0A075B6I1 120 aa7.37□□□□□ -1.23
CDH3-203ENST00000542274 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 B9D2Q9BPU9 175 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 IGHV4-30-4P0DP06 118 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 Q8NAQ8 132 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
CDH3-203ENST00000542274 MGAM2Q2M2H8 2515 aa7.35□□□□□ -1.23
CDH3-203ENST00000542274 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
CDH3-203ENST00000542274 GYPEP15421 78 aa7.35□□□□□ -1.23
CDH3-203ENST00000542274 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
CDH3-203ENST00000542274 TENM3Q9P273 2699 aa7.34□□□□□ -1.23
CDH3-203ENST00000542274 SMIM1B2RUZ4 78 aa7.34□□□□□ -1.23
CDH3-203ENST00000542274 CLPSL2Q6UWE3 100 aa7.34□□□□□ -1.23
CDH3-203ENST00000542274 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
CDH3-203ENST00000542274 IGHV4-28A0A0C4DH34 117 aa7.32□□□□□ -1.24
CDH3-203ENST00000542274 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
CDH3-203ENST00000542274 DNAH3Q8TD57 4116 aa7.32□□□□□ -1.24
CDH3-203ENST00000542274 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
CDH3-203ENST00000542274 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.31□□□□□ -1.24
CDH3-203ENST00000542274 PDE6GP18545 87 aa7.31□□□□□ -1.24
CDH3-203ENST00000542274 CCL18P55774 89 aa7.31□□□□□ -1.24
CDH3-203ENST00000542274 SPINK7P58062 85 aa7.31□□□□□ -1.24
CDH3-203ENST00000542274 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
CDH3-203ENST00000542274 HTN3P15516 51 aa7.3□□□□□ -1.24
CDH3-203ENST00000542274 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CDH3-203ENST00000542274 Q9BRP9 147 aa7.3□□□□□ -1.24
CDH3-203ENST00000542274 MUC7Q8TAX7 377 aa7.29□□□□□ -1.24
CDH3-203ENST00000542274 NDUFB1O75438 58 aa7.29□□□□□ -1.24
CDH3-203ENST00000542274 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
CDH3-203ENST00000542274 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
CDH3-203ENST00000542274 LINC00158P58513 81 aa7.28□□□□□ -1.24
CDH3-203ENST00000542274 PRO0255Q9UI72 69 aa7.28□□□□□ -1.24
CDH3-203ENST00000542274 ASB16-AS1Q495Z4 193 aa7.27□□□□□ -1.25
CDH3-203ENST00000542274 CHCHD10Q8WYQ3 142 aaPredicted RBP7.27□□□□□ -1.25
CDH3-203ENST00000542274 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
CDH3-203ENST00000542274 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
CDH3-203ENST00000542274 IGLV10-54A0A075B6I4 117 aa7.25□□□□□ -1.25
CDH3-203ENST00000542274 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
CDH3-203ENST00000542274 A0A1W2PNM2 257 aa7.25□□□□□ -1.25
CDH3-203ENST00000542274 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
CDH3-203ENST00000542274 RTL8CO15255 209 aa7.22□□□□□ -1.25
CDH3-203ENST00000542274 ROMO1P60602 79 aa7.22□□□□□ -1.25
CDH3-203ENST00000542274 Q6ZR54 194 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms