RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SDK2Q58EX2 2172 aa1.72□□□□□ -2.13
USP28-210ENST00000542033 SRCAPQ6ZRS2 3230 aa1.72□□□□□ -2.13
USP28-210ENST00000542033 IGLV5-48A0A075B6I7 105 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 TRGV1A0A0A0MS02 117 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 IGKV3OR2-268A0A0C4DH90 116 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 A0A1B0GU33 70 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 A0A1B0GU69 56 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 TP53AIP1Q9HCN2 124 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 R4GN34 69 aa1.71□□□□□ -2.14
USP28-210ENST00000542033 UTRNP46939 3433 aa1.7□□□□□ -2.14
USP28-210ENST00000542033 HTN1P15515 57 aa1.7□□□□□ -2.14
USP28-210ENST00000542033 SPINK13Q1W4C9 94 aa1.7□□□□□ -2.14
USP28-210ENST00000542033 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
USP28-210ENST00000542033 NAV3Q8IVL0 2385 aa1.7□□□□□ -2.14
USP28-210ENST00000542033 F5P12259 2224 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 KIAA0100Q14667 2235 aaKnown RBP1.69□□□□□ -2.14
USP28-210ENST00000542033 G3V318 75 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 HRES1P13985 223 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 ACYP2P14621 99 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 DEFB132Q7Z7B7 95 aa1.69□□□□□ -2.14
USP28-210ENST00000542033 USP34Q70CQ2 3546 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 GPR179Q6PRD1 2367 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 IGKV2-24A0A0C4DH68 120 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 LYNX1G3V0Z9 82 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 PRB3Q04118 309 aaPredicted RBP1.68□□□□□ -2.14
USP28-210ENST00000542033 C5orf56Q8N8D9 126 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 U3KQA8 63 aa1.68□□□□□ -2.14
USP28-210ENST00000542033 PRRC2BQ5JSZ5 2229 aaKnown RBP1.68□□□□□ -2.14
USP28-210ENST00000542033 TNRC18O15417 2968 aaPredicted RBP1.68□□□□□ -2.14
USP28-210ENST00000542033 A0A087WTM6 91 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 A8MTW9 85 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 K7EQZ3 153 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 ANGP03950 147 aaKnown RBP1.67□□□□□ -2.14
USP28-210ENST00000542033 PRB1P04280 392 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 CADP27708 2225 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 PDE4DIPQ5VU43 2346 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 BRWD1Q9NSI6 2320 aa1.67□□□□□ -2.14
USP28-210ENST00000542033 KMT2BQ9UMN6 2715 aaPredicted RBP1.66□□□□□ -2.14
USP28-210ENST00000542033 GVQW2A0A096LPI5 108 aaPredicted RBP1.66□□□□□ -2.14
USP28-210ENST00000542033 DEFB1P60022 68 aa1.66□□□□□ -2.14
USP28-210ENST00000542033 CNTRLQ7Z7A1 2325 aa1.66□□□□□ -2.14
USP28-210ENST00000542033 ASXL3Q9C0F0 2248 aa1.66□□□□□ -2.14
USP28-210ENST00000542033 UNC80Q8N2C7 3258 aa1.65□□□□□ -2.14
USP28-210ENST00000542033 DEFB131AP59861 70 aa1.65□□□□□ -2.15
USP28-210ENST00000542033 CCL19Q99731 98 aa1.65□□□□□ -2.15
USP28-210ENST00000542033 MGAQ8IWI9 3026 aa1.65□□□□□ -2.15
USP28-210ENST00000542033 ZZEF1O43149 2961 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 NBDYA0A0U1RRE5 68 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 H3BUX3 64 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 LY6G6CO95867 125 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 LINC00304Q8N9R0 145 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 DEFB105AQ8NG35 78 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 Q96NJ1 140 aa1.64□□□□□ -2.15
USP28-210ENST00000542033 URB1O60287 2271 aaKnown RBP1.64□□□□□ -2.15
USP28-210ENST00000542033 SZT2Q5T011 3432 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 A0A1W2PNN7 141 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 LYNX1P0DP58 116 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 WFDC10BQ8IUB3 73 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 PRO3102Q9H379 93 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 C6orf48Q9UBA6 75 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 EP400Q96L91 3159 aa1.63□□□□□ -2.15
USP28-210ENST00000542033 SORL1Q92673 2214 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 TRIOBPQ9H2D6 2365 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 DNAH14Q0VDD8 3507 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 A0A0G2JQZ4 141 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 WFDC13Q8IUB5 93 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 NOP10Q9NPE3 64 aaKnown RBP1.62□□□□□ -2.15
USP28-210ENST00000542033 PRO0255Q9UI72 69 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 PSORS1C2Q9UIG4 136 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
USP28-210ENST00000542033 FRYQ5TBA9 3013 aa1.61□□□□□ -2.15
USP28-210ENST00000542033 RANBP2P49792 3224 aaKnown RBP1.61□□□□□ -2.15
USP28-210ENST00000542033 DEFB109BQ30KR1 87 aa1.61□□□□□ -2.15
USP28-210ENST00000542033 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
USP28-210ENST00000542033 ABCA1O95477 2261 aa1.61□□□□□ -2.15
USP28-210ENST00000542033 CFAP54Q96N23 3096 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 RPL37AP61513 92 aaKnown RBP1.6□□□□□ -2.15
USP28-210ENST00000542033 PCOTHQ58A44 107 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 Q6ZRX8 168 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 KALRNO60229 2985 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 FRYLO94915 3013 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 ICE1Q9Y2F5 2266 aa1.6□□□□□ -2.15
USP28-210ENST00000542033 C5orf42Q9H799 3197 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 MED13LQ71F56 2210 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 ABCA4P78363 2273 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 MMP24-AS1A0A0U1RRL7 71 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 LELP1Q5T871 98 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 COX6B2Q6YFQ2 88 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 SSBP3-AS1Q7Z2R9 100 aa1.59□□□□□ -2.15
USP28-210ENST00000542033 CACNA1GO43497 2377 aa1.59□□□□□ -2.16
USP28-210ENST00000542033 TECTAO75443 2155 aa1.59□□□□□ -2.16
USP28-210ENST00000542033 MKI67P46013 3256 aaKnown RBP1.59□□□□□ -2.16
USP28-210ENST00000542033 SDK1Q7Z5N4 2213 aa1.59□□□□□ -2.16
USP28-210ENST00000542033 VPS13AQ96RL7 3174 aa1.59□□□□□ -2.16
USP28-210ENST00000542033 SPTBN5Q9NRC6 3674 aaKnown RBP1.59□□□□□ -2.16
USP28-210ENST00000542033 CLPSL2Q6UWE3 100 aa1.58□□□□□ -2.16
USP28-210ENST00000542033 BRD3OSQ6XYD6 125 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms