RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 DNAH12Q6ZR08 3092 aa9.83□□□□□ -0.84
SMARCA4-207ENST00000541122 IGLV5-48A0A075B6I7 105 aa9.82□□□□□ -0.84
SMARCA4-207ENST00000541122 SETD2Q9BYW2 2564 aaPredicted RBP9.82□□□□□ -0.84
SMARCA4-207ENST00000541122 A0A1W2PNM2 257 aa9.82□□□□□ -0.84
SMARCA4-207ENST00000541122 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
SMARCA4-207ENST00000541122 GIG44P09565 113 aaPredicted RBP9.81□□□□□ -0.84
SMARCA4-207ENST00000541122 LRRK2Q5S007 2527 aa9.8□□□□□ -0.84
SMARCA4-207ENST00000541122 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
SMARCA4-207ENST00000541122 RTL8CO15255 209 aa9.79□□□□□ -0.84
SMARCA4-207ENST00000541122 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
SMARCA4-207ENST00000541122 Q5XG85 94 aa9.78□□□□□ -0.84
SMARCA4-207ENST00000541122 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
SMARCA4-207ENST00000541122 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
SMARCA4-207ENST00000541122 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
SMARCA4-207ENST00000541122 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
SMARCA4-207ENST00000541122 CENPFP49454 3210 aa9.75□□□□□ -0.85
SMARCA4-207ENST00000541122 Q96NJ1 140 aa9.75□□□□□ -0.85
SMARCA4-207ENST00000541122 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
SMARCA4-207ENST00000541122 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
SMARCA4-207ENST00000541122 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
SMARCA4-207ENST00000541122 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
SMARCA4-207ENST00000541122 ZFYVE26Q68DK2 2539 aa9.7□□□□□ -0.86
SMARCA4-207ENST00000541122 Q75L30 129 aa9.69□□□□□ -0.86
SMARCA4-207ENST00000541122 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
SMARCA4-207ENST00000541122 DSCR10P59022 87 aa9.69□□□□□ -0.86
SMARCA4-207ENST00000541122 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
SMARCA4-207ENST00000541122 CRIPTQ9P021 101 aa9.67□□□□□ -0.86
SMARCA4-207ENST00000541122 A0A096LNT2 108 aa9.66□□□□□ -0.86
SMARCA4-207ENST00000541122 ZNF861PO60384 105 aa9.66□□□□□ -0.86
SMARCA4-207ENST00000541122 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
SMARCA4-207ENST00000541122 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
SMARCA4-207ENST00000541122 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.86
SMARCA4-207ENST00000541122 IGLV7-46A0A075B6I9 117 aa9.65□□□□□ -0.86
SMARCA4-207ENST00000541122 CHD7Q9P2D1 2997 aa9.64□□□□□ -0.87
SMARCA4-207ENST00000541122 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
SMARCA4-207ENST00000541122 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
SMARCA4-207ENST00000541122 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
SMARCA4-207ENST00000541122 MTORP42345 2549 aa9.6□□□□□ -0.87
SMARCA4-207ENST00000541122 CNBPP62633 177 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-207ENST00000541122 ANKRD17O75179 2603 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-207ENST00000541122 LINC01558Q9Y6Z2 57 aa9.58□□□□□ -0.88
SMARCA4-207ENST00000541122 TRANK1O15050 2925 aa9.58□□□□□ -0.88
SMARCA4-207ENST00000541122 RANBP2P49792 3224 aaKnown RBP9.58□□□□□ -0.88
SMARCA4-207ENST00000541122 KRTAP24-1Q3LI83 254 aa9.58□□□□□ -0.88
SMARCA4-207ENST00000541122 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-207ENST00000541122 FAM229BQ4G0N7 80 aa9.57□□□□□ -0.88
SMARCA4-207ENST00000541122 MKI67P46013 3256 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-207ENST00000541122 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
SMARCA4-207ENST00000541122 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
SMARCA4-207ENST00000541122 TNRC18O15417 2968 aaPredicted RBP9.52□□□□□ -0.88
SMARCA4-207ENST00000541122 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
SMARCA4-207ENST00000541122 SPTBN4Q9H254 2564 aa9.51□□□□□ -0.89
SMARCA4-207ENST00000541122 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
SMARCA4-207ENST00000541122 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
SMARCA4-207ENST00000541122 BRCA2P51587 3418 aa9.49□□□□□ -0.89
SMARCA4-207ENST00000541122 CHD8Q9HCK8 2581 aa9.48□□□□□ -0.89
SMARCA4-207ENST00000541122 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
SMARCA4-207ENST00000541122 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
SMARCA4-207ENST00000541122 F8P00451 2351 aa9.48□□□□□ -0.89
SMARCA4-207ENST00000541122 Q5VV11 94 aa9.48□□□□□ -0.89
SMARCA4-207ENST00000541122 OXTP01178 125 aa9.47□□□□□ -0.89
SMARCA4-207ENST00000541122 POLQO75417 2590 aa9.47□□□□□ -0.89
SMARCA4-207ENST00000541122 A0A087WTM6 91 aa9.47□□□□□ -0.89
SMARCA4-207ENST00000541122 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
SMARCA4-207ENST00000541122 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
SMARCA4-207ENST00000541122 KRTAP10-3P60369 221 aa9.45□□□□□ -0.9
SMARCA4-207ENST00000541122 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
SMARCA4-207ENST00000541122 SPRR1AP35321 89 aa9.42□□□□□ -0.9
SMARCA4-207ENST00000541122 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
SMARCA4-207ENST00000541122 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
SMARCA4-207ENST00000541122 K7EIL1 84 aa9.4□□□□□ -0.9
SMARCA4-207ENST00000541122 HRES1P13985 223 aa9.4□□□□□ -0.9
SMARCA4-207ENST00000541122 Q8NDZ9 215 aa9.39□□□□□ -0.91
SMARCA4-207ENST00000541122 CR1P17927 2039 aa9.39□□□□□ -0.91
SMARCA4-207ENST00000541122 ACANP16112 2415 aa9.39□□□□□ -0.91
SMARCA4-207ENST00000541122 Q8N1X5 172 aa9.38□□□□□ -0.91
SMARCA4-207ENST00000541122 A0A1B0GU33 70 aa9.35□□□□□ -0.91
SMARCA4-207ENST00000541122 SPRR1BP22528 89 aa9.33□□□□□ -0.92
SMARCA4-207ENST00000541122 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
SMARCA4-207ENST00000541122 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
SMARCA4-207ENST00000541122 H3BS24 57 aa9.31□□□□□ -0.92
SMARCA4-207ENST00000541122 WWC2-AS2Q96NR7 200 aa9.31□□□□□ -0.92
SMARCA4-207ENST00000541122 PRAC1Q96KF2 57 aa9.3□□□□□ -0.92
SMARCA4-207ENST00000541122 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
SMARCA4-207ENST00000541122 A0A0D9SG42 100 aa9.29□□□□□ -0.92
SMARCA4-207ENST00000541122 SPINK7P58062 85 aa9.28□□□□□ -0.92
SMARCA4-207ENST00000541122 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
SMARCA4-207ENST00000541122 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
SMARCA4-207ENST00000541122 LUZP6Q538Z0 58 aa9.26□□□□□ -0.93
SMARCA4-207ENST00000541122 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
SMARCA4-207ENST00000541122 KRTAP1-1Q07627 177 aa9.22□□□□□ -0.93
SMARCA4-207ENST00000541122 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
SMARCA4-207ENST00000541122 TNP2Q05952 138 aa9.21□□□□□ -0.93
SMARCA4-207ENST00000541122 CSAG1Q6PB30 78 aa9.21□□□□□ -0.93
SMARCA4-207ENST00000541122 EPG5Q9HCE0 2579 aa9.21□□□□□ -0.94
SMARCA4-207ENST00000541122 Q5W150 140 aa9.19□□□□□ -0.94
SMARCA4-207ENST00000541122 PRRC2CQ9Y520 2896 aaKnown RBP9.19□□□□□ -0.94
SMARCA4-207ENST00000541122 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
SMARCA4-207ENST00000541122 ZNF292O60281 2723 aa9.18□□□□□ -0.94
SMARCA4-207ENST00000541122 PRUNE2Q8WUY3 3088 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms