RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 VWFP04275 2813 aa6.86□□□□□ -1.31
TRAF1-202ENST00000540010 Q6ZRU5 148 aa6.85□□□□□ -1.31
TRAF1-202ENST00000540010 SPINK6Q6UWN8 80 aa6.85□□□□□ -1.31
TRAF1-202ENST00000540010 SMCR5Q8TEV8 140 aa6.85□□□□□ -1.31
TRAF1-202ENST00000540010 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
TRAF1-202ENST00000540010 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
TRAF1-202ENST00000540010 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
TRAF1-202ENST00000540010 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
TRAF1-202ENST00000540010 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
TRAF1-202ENST00000540010 BAHCC1Q9P281 2608 aa6.84□□□□□ -1.31
TRAF1-202ENST00000540010 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.32
TRAF1-202ENST00000540010 LINC00208Q96KT6 92 aa6.84□□□□□ -1.32
TRAF1-202ENST00000540010 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
TRAF1-202ENST00000540010 CRYGAP11844 174 aa6.83□□□□□ -1.32
TRAF1-202ENST00000540010 M0R2N4 97 aa6.82□□□□□ -1.32
TRAF1-202ENST00000540010 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
TRAF1-202ENST00000540010 Q8NAQ8 132 aa6.82□□□□□ -1.32
TRAF1-202ENST00000540010 STAB1Q9NY15 2570 aa6.82□□□□□ -1.32
TRAF1-202ENST00000540010 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
TRAF1-202ENST00000540010 NOTCH1P46531 2555 aa6.81□□□□□ -1.32
TRAF1-202ENST00000540010 KRTAP10-11P60412 298 aa6.81□□□□□ -1.32
TRAF1-202ENST00000540010 IGLV9-49A0A0B4J1Y8 123 aa6.81□□□□□ -1.32
TRAF1-202ENST00000540010 PRYO14603 147 aa6.81□□□□□ -1.32
TRAF1-202ENST00000540010 A0A087WSZ3 146 aa6.8□□□□□ -1.32
TRAF1-202ENST00000540010 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
TRAF1-202ENST00000540010 WIPF1O43516 503 aa6.8□□□□□ -1.32
TRAF1-202ENST00000540010 PSPHP1O15172 72 aa6.79□□□□□ -1.32
TRAF1-202ENST00000540010 C4orf26Q17RF5 130 aa6.79□□□□□ -1.32
TRAF1-202ENST00000540010 COL6A5A8TX70 2615 aa6.79□□□□□ -1.32
TRAF1-202ENST00000540010 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
TRAF1-202ENST00000540010 A6NED7 52 aa6.78□□□□□ -1.32
TRAF1-202ENST00000540010 V9GYY9 64 aa6.77□□□□□ -1.33
TRAF1-202ENST00000540010 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
TRAF1-202ENST00000540010 PRLHP81277 87 aa6.77□□□□□ -1.33
TRAF1-202ENST00000540010 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
TRAF1-202ENST00000540010 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
TRAF1-202ENST00000540010 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
TRAF1-202ENST00000540010 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
TRAF1-202ENST00000540010 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
TRAF1-202ENST00000540010 Q6ZQT0 140 aa6.75□□□□□ -1.33
TRAF1-202ENST00000540010 CXCL6P80162 114 aa6.75□□□□□ -1.33
TRAF1-202ENST00000540010 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
TRAF1-202ENST00000540010 TM2D3Q9BRN9 247 aa6.75□□□□□ -1.33
TRAF1-202ENST00000540010 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
TRAF1-202ENST00000540010 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
TRAF1-202ENST00000540010 ESRGQ1W209 222 aa6.74□□□□□ -1.33
TRAF1-202ENST00000540010 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
TRAF1-202ENST00000540010 SMIM29Q86T20 159 aa6.74□□□□□ -1.33
TRAF1-202ENST00000540010 NBEAL1Q6ZS30 2694 aa6.74□□□□□ -1.33
TRAF1-202ENST00000540010 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
TRAF1-202ENST00000540010 C22orf24Q9Y442 160 aa6.72□□□□□ -1.33
TRAF1-202ENST00000540010 Q9BRP9 147 aa6.72□□□□□ -1.33
TRAF1-202ENST00000540010 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
TRAF1-202ENST00000540010 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
TRAF1-202ENST00000540010 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
TRAF1-202ENST00000540010 TRRAPQ9Y4A5 3859 aa6.71□□□□□ -1.34
TRAF1-202ENST00000540010 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
TRAF1-202ENST00000540010 FBN1P35555 2871 aaKnown RBP6.7□□□□□ -1.34
TRAF1-202ENST00000540010 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
TRAF1-202ENST00000540010 ELOF1P60002 83 aaKnown RBP6.69□□□□□ -1.34
TRAF1-202ENST00000540010 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
TRAF1-202ENST00000540010 HCG22E2RYF7 251 aa6.68□□□□□ -1.34
TRAF1-202ENST00000540010 H0Y9P7 68 aa6.68□□□□□ -1.34
TRAF1-202ENST00000540010 ST20-AS1Q8NBB2 130 aa6.68□□□□□ -1.34
TRAF1-202ENST00000540010 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
TRAF1-202ENST00000540010 Q6ZRP5 223 aa6.66□□□□□ -1.34
TRAF1-202ENST00000540010 H3BNG1 76 aa6.65□□□□□ -1.34
TRAF1-202ENST00000540010 K7EIL1 84 aa6.65□□□□□ -1.35
TRAF1-202ENST00000540010 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.35
TRAF1-202ENST00000540010 PRO0628Q9UI54 55 aa6.65□□□□□ -1.35
TRAF1-202ENST00000540010 SEC61GP60059 68 aa6.64□□□□□ -1.35
TRAF1-202ENST00000540010 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
TRAF1-202ENST00000540010 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
TRAF1-202ENST00000540010 VPREB1P12018 145 aa6.64□□□□□ -1.35
TRAF1-202ENST00000540010 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
TRAF1-202ENST00000540010 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
TRAF1-202ENST00000540010 Q8NBF4 154 aa6.62□□□□□ -1.35
TRAF1-202ENST00000540010 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
TRAF1-202ENST00000540010 Q6ZRX8 168 aa6.62□□□□□ -1.35
TRAF1-202ENST00000540010 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
TRAF1-202ENST00000540010 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
TRAF1-202ENST00000540010 BCE1O60756 84 aa6.61□□□□□ -1.35
TRAF1-202ENST00000540010 LINC00476Q8WZB0 136 aa6.61□□□□□ -1.35
TRAF1-202ENST00000540010 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
TRAF1-202ENST00000540010 MDFIQ99750 246 aa6.61□□□□□ -1.35
TRAF1-202ENST00000540010 LY6G6CO95867 125 aa6.61□□□□□ -1.35
TRAF1-202ENST00000540010 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
TRAF1-202ENST00000540010 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
TRAF1-202ENST00000540010 F8WDY8 70 aa6.59□□□□□ -1.35
TRAF1-202ENST00000540010 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
TRAF1-202ENST00000540010 A0A0G2JQZ4 141 aa6.59□□□□□ -1.35
TRAF1-202ENST00000540010 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
TRAF1-202ENST00000540010 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
TRAF1-202ENST00000540010 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
TRAF1-202ENST00000540010 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
TRAF1-202ENST00000540010 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
TRAF1-202ENST00000540010 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
TRAF1-202ENST00000540010 K7EQZ3 153 aa6.57□□□□□ -1.36
TRAF1-202ENST00000540010 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
TRAF1-202ENST00000540010 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms