RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 FAM229AH3BQW9 127 aa14.47□□□□□ -0.09
TMEM260-202ENST00000538838 Q5VSD8 79 aa14.47□□□□□ -0.09
TMEM260-202ENST00000538838 Q8N1X5 172 aa14.46□□□□□ -0.09
TMEM260-202ENST00000538838 A0A1B0GWB2 263 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 H7C2G1 150 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 BCE1O60756 84 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 SPRR1AP35321 89 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 ZNF73O43830 326 aaPredicted RBP14.44□□□□□ -0.1
TMEM260-202ENST00000538838 KRTAP10-4P60372 401 aaPredicted RBP14.44□□□□□ -0.1
TMEM260-202ENST00000538838 BATFQ16520 125 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 SMIM11BQ8TCY0 68 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 PRO1854Q9UHT4 67 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 CBY1Q9Y3M2 126 aa14.44□□□□□ -0.1
TMEM260-202ENST00000538838 KRTAP4-16G5E9R7 235 aaPredicted RBP14.41□□□□□ -0.1
TMEM260-202ENST00000538838 PLA2G1BP04054 148 aaKnown RBP14.41□□□□□ -0.1
TMEM260-202ENST00000538838 FAM19A1Q7Z5A9 133 aa14.41□□□□□ -0.1
TMEM260-202ENST00000538838 C6orf99Q4VX62 202 aa14.41□□□□□ -0.1
TMEM260-202ENST00000538838 DIRC1Q969H9 104 aa14.41□□□□□ -0.1
TMEM260-202ENST00000538838 SRRM2Q9UQ35 2752 aaKnown RBP14.4□□□□□ -0.1
TMEM260-202ENST00000538838 ETDCA0A1B0GVM5 59 aa14.4□□□□□ -0.1
TMEM260-202ENST00000538838 IGLV7-43P04211 117 aa14.4□□□□□ -0.1
TMEM260-202ENST00000538838 HERC2O95714 4834 aa14.4□□□□□ -0.11
TMEM260-202ENST00000538838 PRLHP81277 87 aa14.39□□□□□ -0.11
TMEM260-202ENST00000538838 UBE2AP49459 152 aa14.37□□□□□ -0.11
TMEM260-202ENST00000538838 Q1RN00 199 aa14.37□□□□□ -0.11
TMEM260-202ENST00000538838 B5MCH6 92 aa14.36□□□□□ -0.11
TMEM260-202ENST00000538838 KRTAP13-1Q8IUC0 172 aa14.36□□□□□ -0.11
TMEM260-202ENST00000538838 RPL28P46779 137 aaKnown RBP14.35□□□□□ -0.11
TMEM260-202ENST00000538838 TSPAN13O95857 204 aa14.33□□□□□ -0.11
TMEM260-202ENST00000538838 SNHG12Q9BXW3 62 aa14.33□□□□□ -0.11
TMEM260-202ENST00000538838 Q6ZRX8 168 aa14.33□□□□□ -0.12
TMEM260-202ENST00000538838 ZNF861PO60384 105 aa14.32□□□□□ -0.12
TMEM260-202ENST00000538838 COX7BP24311 80 aa14.31□□□□□ -0.12
TMEM260-202ENST00000538838 ELOF1P60002 83 aaKnown RBP14.31□□□□□ -0.12
TMEM260-202ENST00000538838 H0Y9J4 135 aa14.3□□□□□ -0.12
TMEM260-202ENST00000538838 TRBV7-6A0A0J9YX20 115 aa14.29□□□□□ -0.12
TMEM260-202ENST00000538838 Q9BRP9 147 aa14.29□□□□□ -0.12
TMEM260-202ENST00000538838 HIGD2AQ9BW72 106 aa14.29□□□□□ -0.12
TMEM260-202ENST00000538838 KRTAP4-5Q9BYR2 181 aa14.29□□□□□ -0.12
TMEM260-202ENST00000538838 TRIAP1O43715 76 aa14.27□□□□□ -0.12
TMEM260-202ENST00000538838 SMCR5Q8TEV8 140 aa14.26□□□□□ -0.13
TMEM260-202ENST00000538838 VAMP3Q15836 100 aa14.26□□□□□ -0.13
TMEM260-202ENST00000538838 PSMB2P49721 201 aa14.25□□□□□ -0.13
TMEM260-202ENST00000538838 PKHD1L1Q86WI1 4243 aa14.25□□□□□ -0.13
TMEM260-202ENST00000538838 NAA38Q9BRA0 125 aaKnown RBP14.24□□□□□ -0.13
TMEM260-202ENST00000538838 SPINK6Q6UWN8 80 aa14.23□□□□□ -0.13
TMEM260-202ENST00000538838 ERC2-IT1O76042 136 aa14.22□□□□□ -0.13
TMEM260-202ENST00000538838 DHRS4-AS1Q9P1J3 65 aa14.2□□□□□ -0.14
TMEM260-202ENST00000538838 TAX1BP3O14907 124 aa14.19□□□□□ -0.14
TMEM260-202ENST00000538838 LINC00575Q6W349 94 aa14.19□□□□□ -0.14
TMEM260-202ENST00000538838 H0YGX0 51 aa14.17□□□□□ -0.14
TMEM260-202ENST00000538838 FAM218AQ96MZ4 157 aa14.17□□□□□ -0.14
TMEM260-202ENST00000538838 INAFM2P0DMQ5 153 aa14.16□□□□□ -0.14
TMEM260-202ENST00000538838 COL5A1-AS1Q5SY13 56 aa14.16□□□□□ -0.14
TMEM260-202ENST00000538838 CLEC2BQ92478 149 aa14.16□□□□□ -0.14
TMEM260-202ENST00000538838 COX6CP09669 75 aa14.15□□□□□ -0.14
TMEM260-202ENST00000538838 ABCA13Q86UQ4 5058 aa14.14□□□□□ -0.15
TMEM260-202ENST00000538838 H3BUT2 72 aa14.14□□□□□ -0.15
TMEM260-202ENST00000538838 SLC25A20O43772 301 aa14.14□□□□□ -0.15
TMEM260-202ENST00000538838 ST20-AS1Q8NBB2 130 aa14.13□□□□□ -0.15
TMEM260-202ENST00000538838 hADV29S1A0JD25 119 aa14.12□□□□□ -0.15
TMEM260-202ENST00000538838 C9orf118A6NHY6 69 aa14.12□□□□□ -0.15
TMEM260-202ENST00000538838 SCGB1C2P0DMR2 95 aa14.12□□□□□ -0.15
TMEM260-202ENST00000538838 SPRR4Q96PI1 79 aa14.1□□□□□ -0.15
TMEM260-202ENST00000538838 ZNF706Q9Y5V0 76 aaPredicted RBP14.08□□□□□ -0.15
TMEM260-202ENST00000538838 KRTAP1-4P0C5Y4 121 aa14.08□□□□□ -0.16
TMEM260-202ENST00000538838 Q6ZQY7 126 aa14.07□□□□□ -0.16
TMEM260-202ENST00000538838 ANAPC11Q9NYG5 84 aa14.06□□□□□ -0.16
TMEM260-202ENST00000538838 FLG2Q5D862 2391 aaPredicted RBP14.06□□□□□ -0.16
TMEM260-202ENST00000538838 GAGE2AQ6NT46 116 aa14.05□□□□□ -0.16
TMEM260-202ENST00000538838 A0A1W2PPM0 123 aa14.04□□□□□ -0.16
TMEM260-202ENST00000538838 A0A1B0GX51 115 aa14.04□□□□□ -0.16
TMEM260-202ENST00000538838 LST1O00453 97 aa14.03□□□□□ -0.16
TMEM260-202ENST00000538838 LYRM7Q5U5X0 104 aa14.03□□□□□ -0.16
TMEM260-202ENST00000538838 DEFB105AQ8NG35 78 aa14.03□□□□□ -0.16
TMEM260-202ENST00000538838 SNCGO76070 127 aa14.02□□□□□ -0.16
TMEM260-202ENST00000538838 TCL1BO95988 128 aa14.02□□□□□ -0.16
TMEM260-202ENST00000538838 LINC01547P58512 204 aaPredicted RBP14.01□□□□□ -0.17
TMEM260-202ENST00000538838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.01□□□□□ -0.17
TMEM260-202ENST00000538838 MYCBP2O75592 4640 aa14.01□□□□□ -0.17
TMEM260-202ENST00000538838 LINC00483Q53H64 154 aa14.01□□□□□ -0.17
TMEM260-202ENST00000538838 IGLV5-48A0A075B6I7 105 aa14□□□□□ -0.17
TMEM260-202ENST00000538838 FABP2P12104 132 aa13.99□□□□□ -0.17
TMEM260-202ENST00000538838 LRP1Q07954 4544 aaKnown RBP13.99□□□□□ -0.17
TMEM260-202ENST00000538838 DNAL4O96015 105 aa13.98□□□□□ -0.17
TMEM260-202ENST00000538838 TRACP01848 142 aa13.97□□□□□ -0.17
TMEM260-202ENST00000538838 FAT3Q8TDW7 4589 aa13.97□□□□□ -0.17
TMEM260-202ENST00000538838 A0A087X002 238 aa13.97□□□□□ -0.17
TMEM260-202ENST00000538838 ATXN8Q156A1 80 aa13.97□□□□□ -0.17
TMEM260-202ENST00000538838 TEX49A0A1B0GTD5 131 aa13.96□□□□□ -0.17
TMEM260-202ENST00000538838 SPRR1BP22528 89 aa13.96□□□□□ -0.17
TMEM260-202ENST00000538838 Q8N377 158 aa13.96□□□□□ -0.17
TMEM260-202ENST00000538838 FAM229BQ4G0N7 80 aa13.95□□□□□ -0.18
TMEM260-202ENST00000538838 TRBV20-1A0A075B6N2 111 aa13.94□□□□□ -0.18
TMEM260-202ENST00000538838 PRR26Q8N8Z3 221 aa13.93□□□□□ -0.18
TMEM260-202ENST00000538838 LINC01600Q96MT4 127 aa13.93□□□□□ -0.18
TMEM260-202ENST00000538838 C3orf22Q8N5N4 141 aa13.93□□□□□ -0.18
TMEM260-202ENST00000538838 CRYGAP11844 174 aa13.92□□□□□ -0.18
TMEM260-202ENST00000538838 OCIAD2Q56VL3 154 aa13.91□□□□□ -0.18
TMEM260-202ENST00000538838 ORMDL1Q9P0S3 153 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms