RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 UBE2D4Q9Y2X8 147 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 MXRA5Q9NR99 2828 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 SBF2Q86WG5 1849 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 DSPP15924 2871 aaKnown RBP0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 NUP188Q5SRE5 1749 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 KNDC1Q76NI1 1749 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 NEBP20929 6669 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 TULP4Q9NRJ4 1543 aa0.89□□□□□ -2.27
SRGAP1-203ENST00000537585 CSMD2Q7Z408 3487 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 CNTRLQ7Z7A1 2325 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 CUBNO60494 3623 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 C18orf32Q8TCD1 76 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 CRIPTQ9P021 101 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 TARBP1Q13395 1621 aaKnown RBP0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 KIF14Q15058 1648 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 HIVEP3Q5T1R4 2406 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 RRBP1Q9P2E9 1410 aaKnown RBP0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 FAM186AA6NE01 2351 aa0.88□□□□□ -2.27
SRGAP1-203ENST00000537585 VPS13CQ709C8 3753 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 DIP2CQ9Y2E4 1556 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 RNF213Q63HN8 5207 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 LINC00959A0A1B0GUT2 108 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 FAM103A1Q9BTL3 118 aaKnown RBP0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 TP53AIP1Q9HCN2 124 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 SIPA1L3O60292 1781 aaPredicted RBP0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 TRIOO75962 3097 aa0.87□□□□□ -2.27
SRGAP1-203ENST00000537585 NIPBLQ6KC79 2804 aaeCLIP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 RGPD4Q7Z3J3 1758 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 KCPQ6ZWJ8 1503 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 TRAV21A0A0B4J279 112 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 TRBV7-4A0A0J9YYF1 115 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 PIGYQ3MUY2 71 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 KNTC1P50748 2209 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 MGAM2Q2M2H8 2515 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 CEP170BQ9Y4F5 1589 aaPredicted RBP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 NSD1Q96L73 2696 aaPredicted RBP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 RGPD1P0DJD0 1748 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 SUPT6HQ7KZ85 1726 aaKnown RBP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 PDCD11Q14690 1871 aaKnown RBP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 PREX2Q70Z35 1606 aa0.86□□□□□ -2.27
SRGAP1-203ENST00000537585 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 UMAD1C9J7I0 102 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 FXYD6Q9H0Q3 95 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 SSPOA2VEC9 5147 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 F8P00451 2351 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 USP32Q8NFA0 1604 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 HMCN2Q8NDA2 5059 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 COL6A6A6NMZ7 2263 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 MYO7BQ6PIF6 2116 aa0.85□□□□□ -2.27
SRGAP1-203ENST00000537585 ROS1P08922 2347 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 CHD7Q9P2D1 2997 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 ITPR2Q14571 2701 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 ABCA8O94911 1581 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 OTOGQ6ZRI0 2925 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 RGPD3A6NKT7 1758 aaPredicted RBP0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 GNG13Q9P2W3 67 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 HILPDAQ9Y5L2 63 aa0.84□□□□□ -2.27
SRGAP1-203ENST00000537585 MYO3AQ8NEV4 1616 aa0.84□□□□□ -2.28
SRGAP1-203ENST00000537585 FANCD2Q9BXW9 1451 aa0.84□□□□□ -2.28
SRGAP1-203ENST00000537585 ATMQ13315 3056 aa0.84□□□□□ -2.28
SRGAP1-203ENST00000537585 MAGI3Q5TCQ9 1506 aa0.84□□□□□ -2.28
SRGAP1-203ENST00000537585 LRRC37A2A6NM11 1700 aa0.84□□□□□ -2.28
SRGAP1-203ENST00000537585 APCP25054 2843 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 EEA1Q15075 1411 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 ANKARQ7Z5J8 1434 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 ASXL3Q9C0F0 2248 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 IFI27P40305 119 aaPredicted RBP0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 PLAC8Q9NZF1 115 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 CROCC2H7BZ55 1655 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 C3P01024 1663 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 PAPPA2Q9BXP8 1791 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 DNAJC13O75165 2243 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 ADGRG4Q8IZF6 3080 aa0.83□□□□□ -2.28
SRGAP1-203ENST00000537585 LAMA4Q16363 1823 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 SVEP1Q4LDE5 3571 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 DMXL2Q8TDJ6 3036 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 CACNA1HO95180 2353 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 LRRC9Q6ZRR7 1453 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 IFI6P09912 130 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 Q8IZM0 81 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 SLIT1O75093 1534 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 PTPRQQ9UMZ3 2332 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
SRGAP1-203ENST00000537585 DOPEY2Q9Y3R5 2298 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 AKAP9Q99996 3911 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 WNK1Q9H4A3 2382 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 I3L3M4 83 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 COX7BP24311 80 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 Q5BKY6 102 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 ATP5EP2Q5VTU8 51 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 CNFNQ9BYD5 112 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 MROH2BQ7Z745 1585 aa0.81□□□□□ -2.28
SRGAP1-203ENST00000537585 CADP27708 2225 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms