RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 TMEM126AQ9H061 195 aa10.82□□□□□ -0.68
CCDC61-201ENST00000536603 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
CCDC61-201ENST00000536603 NDUFC2O95298 119 aa10.81□□□□□ -0.68
CCDC61-201ENST00000536603 UBE2AP49459 152 aa10.81□□□□□ -0.68
CCDC61-201ENST00000536603 A4D1N5 150 aa10.79□□□□□ -0.68
CCDC61-201ENST00000536603 FAM19A1Q7Z5A9 133 aa10.79□□□□□ -0.68
CCDC61-201ENST00000536603 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
CCDC61-201ENST00000536603 KRTAP1-4P0C5Y4 121 aa10.78□□□□□ -0.68
CCDC61-201ENST00000536603 TAL2Q16559 108 aa10.78□□□□□ -0.68
CCDC61-201ENST00000536603 KRTAP13-1Q8IUC0 172 aa10.78□□□□□ -0.68
CCDC61-201ENST00000536603 CEND1Q8N111 149 aa10.78□□□□□ -0.68
CCDC61-201ENST00000536603 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 FXYD2P54710 66 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 PRLHP81277 87 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 HSD52Q0P140 79 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 LINC00337Q8N6G1 96 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
CCDC61-201ENST00000536603 COPS9Q8WXC6 57 aa10.76□□□□□ -0.69
CCDC61-201ENST00000536603 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
CCDC61-201ENST00000536603 CTAG1AP78358 180 aa10.75□□□□□ -0.69
CCDC61-201ENST00000536603 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
CCDC61-201ENST00000536603 PRYO14603 147 aa10.73□□□□□ -0.69
CCDC61-201ENST00000536603 IGLV6-57P01721 117 aa10.73□□□□□ -0.69
CCDC61-201ENST00000536603 DDTP30046 118 aa10.72□□□□□ -0.69
CCDC61-201ENST00000536603 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
CCDC61-201ENST00000536603 CFC1P0CG37 223 aa10.71□□□□□ -0.69
CCDC61-201ENST00000536603 S100A7L2Q5SY68 101 aa10.7□□□□□ -0.7
CCDC61-201ENST00000536603 BVES-AS1Q5T3Y7 98 aa10.7□□□□□ -0.7
CCDC61-201ENST00000536603 SPRR1AP35321 89 aa10.69□□□□□ -0.7
CCDC61-201ENST00000536603 OR13C6PQ8NH95 151 aa10.69□□□□□ -0.7
CCDC61-201ENST00000536603 A6NDN8 102 aa10.68□□□□□ -0.7
CCDC61-201ENST00000536603 HINT1P49773 126 aaPredicted RBP10.68□□□□□ -0.7
CCDC61-201ENST00000536603 HIGD2AQ9BW72 106 aa10.68□□□□□ -0.7
CCDC61-201ENST00000536603 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
CCDC61-201ENST00000536603 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
CCDC61-201ENST00000536603 RPL13AP40429 203 aaKnown RBP10.67□□□□□ -0.7
CCDC61-201ENST00000536603 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
CCDC61-201ENST00000536603 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
CCDC61-201ENST00000536603 A0A0B4J2C4 111 aa10.65□□□□□ -0.7
CCDC61-201ENST00000536603 K7ERJ3 54 aa10.65□□□□□ -0.7
CCDC61-201ENST00000536603 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
CCDC61-201ENST00000536603 A0A087X002 238 aa10.64□□□□□ -0.71
CCDC61-201ENST00000536603 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
CCDC61-201ENST00000536603 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
CCDC61-201ENST00000536603 A6NJY4 79 aa10.64□□□□□ -0.71
CCDC61-201ENST00000536603 CRYGAP11844 174 aa10.64□□□□□ -0.71
CCDC61-201ENST00000536603 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
CCDC61-201ENST00000536603 SMIM11BQ8TCY0 68 aa10.62□□□□□ -0.71
CCDC61-201ENST00000536603 B5MCH6 92 aa10.61□□□□□ -0.71
CCDC61-201ENST00000536603 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
CCDC61-201ENST00000536603 RAB37Q96AX2 223 aa10.61□□□□□ -0.71
CCDC61-201ENST00000536603 PCP4L1A6NKN8 68 aa10.6□□□□□ -0.71
CCDC61-201ENST00000536603 M0R143 59 aa10.6□□□□□ -0.71
CCDC61-201ENST00000536603 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
CCDC61-201ENST00000536603 H7C2G1 150 aa10.59□□□□□ -0.71
CCDC61-201ENST00000536603 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
CCDC61-201ENST00000536603 TYMSOSQ8TAI1 123 aa10.59□□□□□ -0.71
CCDC61-201ENST00000536603 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
CCDC61-201ENST00000536603 LPAP08519 4548 aa10.58□□□□□ -0.72
CCDC61-201ENST00000536603 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
CCDC61-201ENST00000536603 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
CCDC61-201ENST00000536603 CBY1Q9Y3M2 126 aa10.58□□□□□ -0.72
CCDC61-201ENST00000536603 BATFQ16520 125 aa10.57□□□□□ -0.72
CCDC61-201ENST00000536603 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
CCDC61-201ENST00000536603 Q6ZRX8 168 aa10.57□□□□□ -0.72
CCDC61-201ENST00000536603 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
CCDC61-201ENST00000536603 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
CCDC61-201ENST00000536603 Q9BRP9 147 aa10.55□□□□□ -0.72
CCDC61-201ENST00000536603 SNHG12Q9BXW3 62 aa10.54□□□□□ -0.72
CCDC61-201ENST00000536603 TSPAN13O95857 204 aa10.53□□□□□ -0.72
CCDC61-201ENST00000536603 PRR4Q16378 134 aa10.53□□□□□ -0.72
CCDC61-201ENST00000536603 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
CCDC61-201ENST00000536603 Q1RN00 199 aa10.51□□□□□ -0.73
CCDC61-201ENST00000536603 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
CCDC61-201ENST00000536603 COX7BP24311 80 aa10.5□□□□□ -0.73
CCDC61-201ENST00000536603 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
CCDC61-201ENST00000536603 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
CCDC61-201ENST00000536603 TRIAP1O43715 76 aa10.49□□□□□ -0.73
CCDC61-201ENST00000536603 A0A0U1RQV1 116 aa10.48□□□□□ -0.73
CCDC61-201ENST00000536603 LINC00483Q53H64 154 aa10.47□□□□□ -0.73
CCDC61-201ENST00000536603 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
CCDC61-201ENST00000536603 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
CCDC61-201ENST00000536603 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
CCDC61-201ENST00000536603 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
CCDC61-201ENST00000536603 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
CCDC61-201ENST00000536603 DHRS4-AS1Q9P1J3 65 aa10.44□□□□□ -0.74
CCDC61-201ENST00000536603 VAMP3Q15836 100 aa10.43□□□□□ -0.74
CCDC61-201ENST00000536603 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
CCDC61-201ENST00000536603 PSMB2P49721 201 aa10.42□□□□□ -0.74
CCDC61-201ENST00000536603 IGLV9-49A0A0B4J1Y8 123 aa10.4□□□□□ -0.74
CCDC61-201ENST00000536603 CLEC2BQ92478 149 aa10.4□□□□□ -0.74
CCDC61-201ENST00000536603 H0YGX0 51 aa10.38□□□□□ -0.75
CCDC61-201ENST00000536603 Q8NBF4 154 aa10.38□□□□□ -0.75
CCDC61-201ENST00000536603 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
CCDC61-201ENST00000536603 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
CCDC61-201ENST00000536603 H3BUT2 72 aa10.37□□□□□ -0.75
CCDC61-201ENST00000536603 MOBPQ13875 183 aa10.37□□□□□ -0.75
CCDC61-201ENST00000536603 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
CCDC61-201ENST00000536603 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
CCDC61-201ENST00000536603 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms