RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
PTPN21-202ENST00000536337 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
PTPN21-202ENST00000536337 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
PTPN21-202ENST00000536337 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
PTPN21-202ENST00000536337 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
PTPN21-202ENST00000536337 UBE2AP49459 152 aa8.65□□□□□ -1.03
PTPN21-202ENST00000536337 C1orf137Q5JT78 98 aa8.65□□□□□ -1.03
PTPN21-202ENST00000536337 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
PTPN21-202ENST00000536337 TENM1Q9UKZ4 2725 aa8.63□□□□□ -1.03
PTPN21-202ENST00000536337 VPREB1P12018 145 aa8.62□□□□□ -1.03
PTPN21-202ENST00000536337 FAM168BA1KXE4 195 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
PTPN21-202ENST00000536337 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 PRLHP81277 87 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
PTPN21-202ENST00000536337 H0Y9J4 135 aa8.6□□□□□ -1.03
PTPN21-202ENST00000536337 PDZD2O15018 2839 aa8.6□□□□□ -1.03
PTPN21-202ENST00000536337 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
PTPN21-202ENST00000536337 NDUFS5O43920 106 aa8.59□□□□□ -1.03
PTPN21-202ENST00000536337 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
PTPN21-202ENST00000536337 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
PTPN21-202ENST00000536337 KRTAP10-11P60412 298 aa8.59□□□□□ -1.04
PTPN21-202ENST00000536337 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
PTPN21-202ENST00000536337 LINC01556Q5JQF7 62 aa8.58□□□□□ -1.04
PTPN21-202ENST00000536337 KRTAP24-1Q3LI83 254 aa8.58□□□□□ -1.04
PTPN21-202ENST00000536337 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
PTPN21-202ENST00000536337 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
PTPN21-202ENST00000536337 TENM4Q6N022 2769 aa8.57□□□□□ -1.04
PTPN21-202ENST00000536337 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
PTPN21-202ENST00000536337 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
PTPN21-202ENST00000536337 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
PTPN21-202ENST00000536337 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
PTPN21-202ENST00000536337 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
PTPN21-202ENST00000536337 MP68P56378 58 aa8.56□□□□□ -1.04
PTPN21-202ENST00000536337 CXCL6P80162 114 aa8.55□□□□□ -1.04
PTPN21-202ENST00000536337 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
PTPN21-202ENST00000536337 V9GYY9 64 aa8.55□□□□□ -1.04
PTPN21-202ENST00000536337 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
PTPN21-202ENST00000536337 A0A087WSZ3 146 aa8.54□□□□□ -1.04
PTPN21-202ENST00000536337 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
PTPN21-202ENST00000536337 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
PTPN21-202ENST00000536337 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
PTPN21-202ENST00000536337 KMT2BQ9UMN6 2715 aaPredicted RBP8.53□□□□□ -1.04
PTPN21-202ENST00000536337 CASC10Q5T4H9 136 aa8.53□□□□□ -1.04
PTPN21-202ENST00000536337 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
PTPN21-202ENST00000536337 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
PTPN21-202ENST00000536337 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
PTPN21-202ENST00000536337 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
PTPN21-202ENST00000536337 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
PTPN21-202ENST00000536337 NDUFC1O43677 76 aa8.49□□□□□ -1.05
PTPN21-202ENST00000536337 SERP1Q9Y6X1 66 aa8.49□□□□□ -1.05
PTPN21-202ENST00000536337 NDUFB1O75438 58 aa8.49□□□□□ -1.05
PTPN21-202ENST00000536337 Q6ZRX8 168 aa8.49□□□□□ -1.05
PTPN21-202ENST00000536337 PRYO14603 147 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 H3BNG1 76 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 B9D2Q9BPU9 175 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 C1orf195Q5TG92 126 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 TENM3Q9P273 2699 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 Q8N377 158 aa8.48□□□□□ -1.05
PTPN21-202ENST00000536337 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
PTPN21-202ENST00000536337 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
PTPN21-202ENST00000536337 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
PTPN21-202ENST00000536337 Q9BRP9 147 aa8.47□□□□□ -1.05
PTPN21-202ENST00000536337 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.05
PTPN21-202ENST00000536337 PKD1L1Q8TDX9 2849 aa8.46□□□□□ -1.06
PTPN21-202ENST00000536337 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
PTPN21-202ENST00000536337 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
PTPN21-202ENST00000536337 SPINK6Q6UWN8 80 aa8.44□□□□□ -1.06
PTPN21-202ENST00000536337 SEC61GP60059 68 aa8.43□□□□□ -1.06
PTPN21-202ENST00000536337 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
PTPN21-202ENST00000536337 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
PTPN21-202ENST00000536337 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
PTPN21-202ENST00000536337 RPL37AP61513 92 aaKnown RBP8.43□□□□□ -1.06
PTPN21-202ENST00000536337 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
PTPN21-202ENST00000536337 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
PTPN21-202ENST00000536337 Q8NBF4 154 aa8.42□□□□□ -1.06
PTPN21-202ENST00000536337 H7BZZ5 65 aa8.42□□□□□ -1.06
PTPN21-202ENST00000536337 LINC00474Q9P2X8 69 aa8.41□□□□□ -1.06
PTPN21-202ENST00000536337 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.06
PTPN21-202ENST00000536337 K7EQZ3 153 aa8.4□□□□□ -1.07
PTPN21-202ENST00000536337 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
PTPN21-202ENST00000536337 PRO0628Q9UI54 55 aa8.39□□□□□ -1.07
PTPN21-202ENST00000536337 HCG22E2RYF7 251 aa8.38□□□□□ -1.07
PTPN21-202ENST00000536337 F8WDY8 70 aa8.38□□□□□ -1.07
PTPN21-202ENST00000536337 PSPHP1O15172 72 aa8.38□□□□□ -1.07
PTPN21-202ENST00000536337 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
PTPN21-202ENST00000536337 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
PTPN21-202ENST00000536337 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
PTPN21-202ENST00000536337 KLKP1Q107X0 134 aa8.35□□□□□ -1.07
PTPN21-202ENST00000536337 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
PTPN21-202ENST00000536337 K7EIL1 84 aa8.35□□□□□ -1.07
PTPN21-202ENST00000536337 BCE1O60756 84 aa8.35□□□□□ -1.07
PTPN21-202ENST00000536337 EPM2AB3EWF7 344 aa8.34□□□□□ -1.07
PTPN21-202ENST00000536337 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
PTPN21-202ENST00000536337 IGHV6-1A0A0B4J1U7 121 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms