RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 KRTAP13-1Q8IUC0 172 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 XAGE1AQ9HD64 81 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 TP73-AS1Q9UF72 201 aa2.93□□□□□ -1.94
CHD4-205ENST00000536301 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
CHD4-205ENST00000536301 TRAV12-1A0A0B4J245 112 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 RPL37AP8A6NKH3 93 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 NDUFC2-KCTD14E9PQ53 114 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 NPYP01303 97 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 RPL28P46779 137 aaKnown RBP2.92□□□□□ -1.94
CHD4-205ENST00000536301 PSMB2P49721 201 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 HERVK_113P61574 105 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
CHD4-205ENST00000536301 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
CHD4-205ENST00000536301 ORMDL2Q53FV1 153 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 Q8N8P6 123 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 SS18L2Q9UHA2 77 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
CHD4-205ENST00000536301 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
CHD4-205ENST00000536301 A0A096LNJ9 63 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 LOC107984156A0A0G2JMH3 177 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 B5MCH6 92 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 F8WDY8 70 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 K7ERJ3 54 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 PPP1R17O96001 155 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 CFC1BP0CG36 223 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 NDUFV3P56181 108 aaKnown RBP2.91□□□□□ -1.94
CHD4-205ENST00000536301 SEC61BP60468 96 aaKnown RBP2.91□□□□□ -1.94
CHD4-205ENST00000536301 FAM229BQ4G0N7 80 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 SCGB1D4Q6XE38 83 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 ARL17AQ8IVW1 177 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 AMN1Q8IY45 258 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 LINC00337Q8N6G1 96 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 LINC00167Q96N53 147 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 C20orf78Q9BR46 151 aa2.91□□□□□ -1.94
CHD4-205ENST00000536301 CSDC2Q9Y534 153 aaKnown RBP2.91□□□□□ -1.94
CHD4-205ENST00000536301 IGKV2D-26A0A0A0MRZ7 120 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 TRBV30A0A0K0K1B3 111 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 F8VRH5 84 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 TNFRSF6BO95407 300 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 RPL32P62910 135 aaKnown RBP2.9□□□□□ -1.95
CHD4-205ENST00000536301 HERV-K104P63124 156 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 ATXN8Q156A1 80 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
CHD4-205ENST00000536301 NRACQ8N912 160 aa2.9□□□□□ -1.95
CHD4-205ENST00000536301 ACYP1P07311 99 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 COX6CP09669 75 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 PRLHP81277 87 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 FP248Q71RG6 208 aaPredicted RBP2.89□□□□□ -1.95
CHD4-205ENST00000536301 SMIM20Q8N5G0 67 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 SCGB3A1Q96QR1 104 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 TIMM21Q9BVV7 248 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 IMUPQ9GZP8 106 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 PRO1854Q9UHT4 67 aa2.89□□□□□ -1.95
CHD4-205ENST00000536301 FAM240AA0A1B0GVK7 77 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 ZNF815PA8K554 130 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 VCYO14598 125 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 SLC25A20O43772 301 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 UBE2AP49459 152 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 SUMO2P61956 95 aaKnown RBP2.88□□□□□ -1.95
CHD4-205ENST00000536301 C5orf47Q569G3 176 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 XP32Q5T750 250 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 DAND5Q8N907 189 aa2.88□□□□□ -1.95
CHD4-205ENST00000536301 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 SMCPP49901 116 aaPredicted RBP2.87□□□□□ -1.95
CHD4-205ENST00000536301 MEIG1Q5JSS6 88 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 TOMM6Q96B49 74 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 TMEM141Q96I45 108 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 TOMM7Q9P0U1 55 aa2.87□□□□□ -1.95
CHD4-205ENST00000536301 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 A0A1B0GX51 115 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 H3BT86 120 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 TCL1BO95988 128 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 CFC1P0CG37 223 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 LGALS3P17931 250 aaKnown RBP2.86□□□□□ -1.95
CHD4-205ENST00000536301 MRPS36P82909 103 aaKnown RBP2.86□□□□□ -1.95
CHD4-205ENST00000536301 PCOTHQ58A44 107 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 OR13C6PQ8NH95 151 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 PLEKHB2Q96CS7 222 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 SMIM2Q9BVW6 85 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 TTTY13Q9BZ97 58 aa2.86□□□□□ -1.95
CHD4-205ENST00000536301 IGLV8-61A0A075B6I0 122 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 IGLV4-3A0A075B6K6 122 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 C11orf86A6NJI1 115 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 C9JAW5 83 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
CHD4-205ENST00000536301 CCDC179H3BU77 68 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 J3KT08 172 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 M0R2T5 61 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 UQCRQO14949 82 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
CHD4-205ENST00000536301 Q1RN00 199 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 SPAG11AQ6PDA7 123 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 Q8NBF4 154 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms