RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 COL5A1-AS1Q5SY13 56 aa8.75□□□□□ -1.01
HIF3A-215ENST00000533145 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
HIF3A-215ENST00000533145 TSPAN13O95857 204 aa8.74□□□□□ -1.01
HIF3A-215ENST00000533145 HAMPP81172 84 aa8.74□□□□□ -1.01
HIF3A-215ENST00000533145 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
HIF3A-215ENST00000533145 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
HIF3A-215ENST00000533145 TAX1BP3O14907 124 aa8.73□□□□□ -1.01
HIF3A-215ENST00000533145 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
HIF3A-215ENST00000533145 H7C2G1 150 aa8.72□□□□□ -1.01
HIF3A-215ENST00000533145 Q1RN00 199 aa8.72□□□□□ -1.01
HIF3A-215ENST00000533145 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
HIF3A-215ENST00000533145 C6orf99Q4VX62 202 aa8.71□□□□□ -1.02
HIF3A-215ENST00000533145 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
HIF3A-215ENST00000533145 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
HIF3A-215ENST00000533145 VAMP3Q15836 100 aa8.7□□□□□ -1.02
HIF3A-215ENST00000533145 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
HIF3A-215ENST00000533145 TRIAP1O43715 76 aa8.69□□□□□ -1.02
HIF3A-215ENST00000533145 BCE1O60756 84 aa8.69□□□□□ -1.02
HIF3A-215ENST00000533145 ETDCA0A1B0GVM5 59 aa8.68□□□□□ -1.02
HIF3A-215ENST00000533145 B5MCH6 92 aa8.68□□□□□ -1.02
HIF3A-215ENST00000533145 H0Y9J4 135 aa8.68□□□□□ -1.02
HIF3A-215ENST00000533145 H0YGX0 51 aa8.68□□□□□ -1.02
HIF3A-215ENST00000533145 COX6CP09669 75 aa8.68□□□□□ -1.02
HIF3A-215ENST00000533145 ELOF1P60002 83 aaKnown RBP8.68□□□□□ -1.02
HIF3A-215ENST00000533145 PSMB2P49721 201 aa8.67□□□□□ -1.02
HIF3A-215ENST00000533145 H3BUT2 72 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 COX7BP24311 80 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 Q6ZRX8 168 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 KRTAP13-1Q8IUC0 172 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
HIF3A-215ENST00000533145 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-215ENST00000533145 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.02
HIF3A-215ENST00000533145 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.03
HIF3A-215ENST00000533145 NAA38Q9BRA0 125 aaKnown RBP8.64□□□□□ -1.03
HIF3A-215ENST00000533145 A0A1B0GX51 115 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 SCGB1C2P0DMR2 95 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
HIF3A-215ENST00000533145 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 LINC00575Q6W349 94 aa8.63□□□□□ -1.03
HIF3A-215ENST00000533145 ZNF861PO60384 105 aa8.62□□□□□ -1.03
HIF3A-215ENST00000533145 UBE2AP49459 152 aa8.62□□□□□ -1.03
HIF3A-215ENST00000533145 Q9BRP9 147 aa8.62□□□□□ -1.03
HIF3A-215ENST00000533145 DHRS4-AS1Q9P1J3 65 aa8.62□□□□□ -1.03
HIF3A-215ENST00000533145 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
HIF3A-215ENST00000533145 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 FABP2P12104 132 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 PRLHP81277 87 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 FAM218AQ96MZ4 157 aa8.6□□□□□ -1.03
HIF3A-215ENST00000533145 hADV29S1A0JD25 119 aa8.59□□□□□ -1.03
HIF3A-215ENST00000533145 SLC25A20O43772 301 aa8.59□□□□□ -1.03
HIF3A-215ENST00000533145 CLEC2BQ92478 149 aa8.59□□□□□ -1.03
HIF3A-215ENST00000533145 LST1O00453 97 aa8.58□□□□□ -1.04
HIF3A-215ENST00000533145 SNCGO76070 127 aa8.58□□□□□ -1.04
HIF3A-215ENST00000533145 TCL1BO95988 128 aa8.57□□□□□ -1.04
HIF3A-215ENST00000533145 TRACP01848 142 aa8.57□□□□□ -1.04
HIF3A-215ENST00000533145 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
HIF3A-215ENST00000533145 HSPG2P98160 4391 aa8.56□□□□□ -1.04
HIF3A-215ENST00000533145 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
HIF3A-215ENST00000533145 Q8N1X5 172 aa8.56□□□□□ -1.04
HIF3A-215ENST00000533145 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
HIF3A-215ENST00000533145 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
HIF3A-215ENST00000533145 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.55□□□□□ -1.04
HIF3A-215ENST00000533145 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
HIF3A-215ENST00000533145 Q5VSD8 79 aa8.54□□□□□ -1.04
HIF3A-215ENST00000533145 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
HIF3A-215ENST00000533145 SPCS1Q9Y6A9 102 aa8.53□□□□□ -1.04
HIF3A-215ENST00000533145 OCIAD2Q56VL3 154 aa8.52□□□□□ -1.05
HIF3A-215ENST00000533145 FAT1Q14517 4588 aa8.52□□□□□ -1.05
HIF3A-215ENST00000533145 K7EP34 96 aa8.51□□□□□ -1.05
HIF3A-215ENST00000533145 Q6ZQY7 126 aa8.51□□□□□ -1.05
HIF3A-215ENST00000533145 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
HIF3A-215ENST00000533145 H3BQ85 93 aa8.5□□□□□ -1.05
HIF3A-215ENST00000533145 DNAL4O96015 105 aa8.5□□□□□ -1.05
HIF3A-215ENST00000533145 GHRHP01286 108 aa8.5□□□□□ -1.05
HIF3A-215ENST00000533145 LINC01547P58512 204 aaPredicted RBP8.5□□□□□ -1.05
HIF3A-215ENST00000533145 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
HIF3A-215ENST00000533145 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
HIF3A-215ENST00000533145 SPRR1BP22528 89 aa8.49□□□□□ -1.05
HIF3A-215ENST00000533145 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
HIF3A-215ENST00000533145 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
HIF3A-215ENST00000533145 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
HIF3A-215ENST00000533145 H3BMG7 143 aa8.48□□□□□ -1.05
HIF3A-215ENST00000533145 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
HIF3A-215ENST00000533145 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
HIF3A-215ENST00000533145 A0A1B0GV90 55 aa8.47□□□□□ -1.05
HIF3A-215ENST00000533145 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
HIF3A-215ENST00000533145 Q8N377 158 aa8.47□□□□□ -1.05
HIF3A-215ENST00000533145 TMEM256-PLSCR3K7ERE1 68 aa8.45□□□□□ -1.06
HIF3A-215ENST00000533145 LINC01600Q96MT4 127 aa8.45□□□□□ -1.06
HIF3A-215ENST00000533145 C9JAW5 83 aa8.44□□□□□ -1.06
HIF3A-215ENST00000533145 BAALC-AS2P0C853 105 aa8.44□□□□□ -1.06
HIF3A-215ENST00000533145 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
HIF3A-215ENST00000533145 KRTAP1-4P0C5Y4 121 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms