RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KRTAP10-8P60410 259 aa10.15□□□□□ -0.78
PKP3-209ENST00000533069 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
PKP3-209ENST00000533069 FXYD2P54710 66 aa10.14□□□□□ -0.79
PKP3-209ENST00000533069 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
PKP3-209ENST00000533069 H0Y9J4 135 aa10.13□□□□□ -0.79
PKP3-209ENST00000533069 VPREB1P12018 145 aa10.13□□□□□ -0.79
PKP3-209ENST00000533069 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
PKP3-209ENST00000533069 M0R378 163 aa10.12□□□□□ -0.79
PKP3-209ENST00000533069 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
PKP3-209ENST00000533069 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
PKP3-209ENST00000533069 EIF4EBP3O60516 100 aaPredicted RBP10.11□□□□□ -0.79
PKP3-209ENST00000533069 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
PKP3-209ENST00000533069 NHP2Q9NX24 153 aaKnown RBP10.1□□□□□ -0.79
PKP3-209ENST00000533069 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
PKP3-209ENST00000533069 CFC1P0CG37 223 aa10.09□□□□□ -0.79
PKP3-209ENST00000533069 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
PKP3-209ENST00000533069 S100A7L2Q5SY68 101 aa10.08□□□□□ -0.8
PKP3-209ENST00000533069 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
PKP3-209ENST00000533069 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
PKP3-209ENST00000533069 BATFQ16520 125 aa10.07□□□□□ -0.8
PKP3-209ENST00000533069 ZNF861PO60384 105 aa10.06□□□□□ -0.8
PKP3-209ENST00000533069 LINC00167Q96N53 147 aa10.06□□□□□ -0.8
PKP3-209ENST00000533069 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
PKP3-209ENST00000533069 NCR3O14931 201 aa10.05□□□□□ -0.8
PKP3-209ENST00000533069 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
PKP3-209ENST00000533069 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
PKP3-209ENST00000533069 LINC00337Q8N6G1 96 aa10.05□□□□□ -0.8
PKP3-209ENST00000533069 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
PKP3-209ENST00000533069 IGLV1-50A0A075B6I6 118 aa10.04□□□□□ -0.8
PKP3-209ENST00000533069 BCE1O60756 84 aa10.04□□□□□ -0.8
PKP3-209ENST00000533069 Q8NDZ9 215 aa10.04□□□□□ -0.8
PKP3-209ENST00000533069 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
PKP3-209ENST00000533069 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
PKP3-209ENST00000533069 GAGE10A6NGK3 116 aa10.02□□□□□ -0.81
PKP3-209ENST00000533069 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.81
PKP3-209ENST00000533069 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
PKP3-209ENST00000533069 PRR26Q8N8Z3 221 aa10.02□□□□□ -0.81
PKP3-209ENST00000533069 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
PKP3-209ENST00000533069 PRYO14603 147 aa10□□□□□ -0.81
PKP3-209ENST00000533069 Q1RN00 199 aa10□□□□□ -0.81
PKP3-209ENST00000533069 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
PKP3-209ENST00000533069 TRAV23DV6A0A075B6W5 121 aa9.99□□□□□ -0.81
PKP3-209ENST00000533069 K7ERJ3 54 aa9.99□□□□□ -0.81
PKP3-209ENST00000533069 KCNQ1DNQ9H478 68 aa9.99□□□□□ -0.81
PKP3-209ENST00000533069 COX6CP09669 75 aa9.98□□□□□ -0.81
PKP3-209ENST00000533069 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
PKP3-209ENST00000533069 VAMP3Q15836 100 aa9.97□□□□□ -0.81
PKP3-209ENST00000533069 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
PKP3-209ENST00000533069 UBE2AP49459 152 aa9.96□□□□□ -0.82
PKP3-209ENST00000533069 ZNF73O43830 326 aaPredicted RBP9.95□□□□□ -0.82
PKP3-209ENST00000533069 TSPAN13O95857 204 aa9.95□□□□□ -0.82
PKP3-209ENST00000533069 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
PKP3-209ENST00000533069 C9orf118A6NHY6 69 aa9.94□□□□□ -0.82
PKP3-209ENST00000533069 H7C2G1 150 aa9.94□□□□□ -0.82
PKP3-209ENST00000533069 PSMB2P49721 201 aa9.94□□□□□ -0.82
PKP3-209ENST00000533069 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
PKP3-209ENST00000533069 H0YGX0 51 aa9.93□□□□□ -0.82
PKP3-209ENST00000533069 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
PKP3-209ENST00000533069 SPRR1AP35321 89 aa9.93□□□□□ -0.82
PKP3-209ENST00000533069 SNCGO76070 127 aa9.91□□□□□ -0.82
PKP3-209ENST00000533069 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
PKP3-209ENST00000533069 C6orf99Q4VX62 202 aa9.9□□□□□ -0.82
PKP3-209ENST00000533069 TRIAP1O43715 76 aa9.89□□□□□ -0.83
PKP3-209ENST00000533069 FAM19A1Q7Z5A9 133 aa9.89□□□□□ -0.83
PKP3-209ENST00000533069 LRP2P98164 4655 aa9.89□□□□□ -0.83
PKP3-209ENST00000533069 A0A1B0GX51 115 aa9.88□□□□□ -0.83
PKP3-209ENST00000533069 H3BUT2 72 aa9.88□□□□□ -0.83
PKP3-209ENST00000533069 SCGB1C2P0DMR2 95 aa9.88□□□□□ -0.83
PKP3-209ENST00000533069 CRYGAP11844 174 aa9.88□□□□□ -0.83
PKP3-209ENST00000533069 FABP2P12104 132 aa9.88□□□□□ -0.83
PKP3-209ENST00000533069 ELOF1P60002 83 aaKnown RBP9.88□□□□□ -0.83
PKP3-209ENST00000533069 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
PKP3-209ENST00000533069 COX7BP24311 80 aa9.87□□□□□ -0.83
PKP3-209ENST00000533069 PRLHP81277 87 aa9.87□□□□□ -0.83
PKP3-209ENST00000533069 A0A087X002 238 aa9.86□□□□□ -0.83
PKP3-209ENST00000533069 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
PKP3-209ENST00000533069 KRTAP4-16G5E9R7 235 aaPredicted RBP9.86□□□□□ -0.83
PKP3-209ENST00000533069 SLC25A20O43772 301 aa9.86□□□□□ -0.83
PKP3-209ENST00000533069 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
PKP3-209ENST00000533069 Q6ZRX8 168 aa9.85□□□□□ -0.83
PKP3-209ENST00000533069 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
PKP3-209ENST00000533069 B5MCH6 92 aa9.83□□□□□ -0.84
PKP3-209ENST00000533069 GHRHP01286 108 aa9.83□□□□□ -0.84
PKP3-209ENST00000533069 TYMSOSQ8TAI1 123 aa9.83□□□□□ -0.84
PKP3-209ENST00000533069 ATXN8Q156A1 80 aa9.81□□□□□ -0.84
PKP3-209ENST00000533069 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
PKP3-209ENST00000533069 ANAPC11Q9NYG5 84 aa9.81□□□□□ -0.84
PKP3-209ENST00000533069 NAA38Q9BRA0 125 aaKnown RBP9.8□□□□□ -0.84
PKP3-209ENST00000533069 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
PKP3-209ENST00000533069 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
PKP3-209ENST00000533069 H3BQ85 93 aa9.79□□□□□ -0.84
PKP3-209ENST00000533069 LST1O00453 97 aa9.79□□□□□ -0.84
PKP3-209ENST00000533069 TRACP01848 142 aa9.79□□□□□ -0.84
PKP3-209ENST00000533069 GTF2H5Q6ZYL4 71 aa9.79□□□□□ -0.84
PKP3-209ENST00000533069 DNAL4O96015 105 aa9.78□□□□□ -0.84
PKP3-209ENST00000533069 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
PKP3-209ENST00000533069 OCIAD2Q56VL3 154 aa9.78□□□□□ -0.84
PKP3-209ENST00000533069 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
PKP3-209ENST00000533069 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
PKP3-209ENST00000533069 TCL1BO95988 128 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms