RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 DEFB114Q30KQ6 69 aa2.9□□□□□ -1.95
ECHDC1-222ENST00000531967 MGPP08493 103 aa2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 RNASE3P12724 160 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 RP1L1Q8IWN7 2480 aaPredicted RBP2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 DEFB112Q30KQ8 113 aa2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 OTOGLQ3ZCN5 2332 aa2.89□□□□□ -1.95
ECHDC1-222ENST00000531967 CFAP47Q6ZTR5 3102 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 PRB2P02812 416 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 PRB1P04280 392 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 IGKV4-1P06312 121 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 CCL18P55774 89 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 PRR9Q5T870 116 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 COA5Q86WW8 74 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 CACNA1HO95180 2353 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 ETDCA0A1B0GVM5 59 aa2.88□□□□□ -1.95
ECHDC1-222ENST00000531967 BOD1L1Q8NFC6 3051 aa2.87□□□□□ -1.95
ECHDC1-222ENST00000531967 M0QY20 66 aa2.87□□□□□ -1.95
ECHDC1-222ENST00000531967 APELAP0DMC3 54 aa2.87□□□□□ -1.95
ECHDC1-222ENST00000531967 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
ECHDC1-222ENST00000531967 PIEZO2Q9H5I5 2752 aa2.87□□□□□ -1.95
ECHDC1-222ENST00000531967 ASPMQ8IZT6 3477 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 CNOT1A5YKK6 2376 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 TRGV2A0A075B6R0 118 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 CEP250Q9BV73 2442 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 PKDREJQ9NTG1 2253 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 ROS1P08922 2347 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 A0A1W2PNN7 141 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 UQCR11O14957 56 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 MINOS1Q5TGZ0 78 aa2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 SMG1Q96Q15 3661 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-222ENST00000531967 EP300Q09472 2414 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 NBDYA0A0U1RRE5 68 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 LINC00959A0A1B0GUT2 108 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 ANKRD11Q6UB99 2663 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 KALRNO60229 2985 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 ABCA1O95477 2261 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 ZNF292O60281 2723 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 MAP1BP46821 2468 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 BSNQ9UPA5 3926 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 ZZEF1O43149 2961 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 SMIM11BQ8TCY0 68 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 KCNQ1DNQ9H478 68 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 DMXL1Q9Y485 3027 aa2.85□□□□□ -1.95
ECHDC1-222ENST00000531967 ACACAQ13085 2346 aa2.84□□□□□ -1.95
ECHDC1-222ENST00000531967 PCNX1Q96RV3 2341 aa2.84□□□□□ -1.95
ECHDC1-222ENST00000531967 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
ECHDC1-222ENST00000531967 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
ECHDC1-222ENST00000531967 MGAQ8IWI9 3026 aa2.84□□□□□ -1.95
ECHDC1-222ENST00000531967 LAMA5O15230 3695 aa2.84□□□□□ -1.96
ECHDC1-222ENST00000531967 ANKHD1Q8IWZ3 2542 aaKnown RBP2.84□□□□□ -1.96
ECHDC1-222ENST00000531967 RPL37AP61513 92 aaKnown RBP2.84□□□□□ -1.96
ECHDC1-222ENST00000531967 TPRP12270 2363 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 LYNX1G3V0Z9 82 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 LYNX1P0DP58 116 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 DMXL2Q8TDJ6 3036 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 A0A087WTM6 91 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 PRB3Q04118 309 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 APC2O95996 2303 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 TTC28Q96AY4 2481 aa2.83□□□□□ -1.96
ECHDC1-222ENST00000531967 AKAP13Q12802 2813 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 KRTAP13-2Q52LG2 175 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 TACC2O95359 2948 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 ATMQ13315 3056 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
ECHDC1-222ENST00000531967 FN1P02751 2386 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-222ENST00000531967 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
ECHDC1-222ENST00000531967 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
ECHDC1-222ENST00000531967 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 TLN1Q9Y490 2541 aaKnown RBP2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 LRBAP50851 2863 aa2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 M0R2N4 97 aa2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 C5orf56Q8N8D9 126 aa2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 RIF1Q5UIP0 2472 aaKnown RBP2.8□□□□□ -1.96
ECHDC1-222ENST00000531967 H3BUA1 57 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 WNK2Q9Y3S1 2297 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 DCHS2Q6V1P9 2916 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 GVINP1Q7Z2Y8 2422 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 COX7BP24311 80 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 USMG5Q96IX5 58 aa2.79□□□□□ -1.96
ECHDC1-222ENST00000531967 LINC00158P58513 81 aa2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 A8MTW9 85 aa2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 G3V318 75 aa2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 PTPRZ1P23471 2315 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 PTPRQQ9UMZ3 2332 aa2.78□□□□□ -1.96
ECHDC1-222ENST00000531967 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.97
ECHDC1-222ENST00000531967 INE1O15225 51 aa2.77□□□□□ -1.97
ECHDC1-222ENST00000531967 COX6A2Q02221 97 aa2.77□□□□□ -1.97
ECHDC1-222ENST00000531967 SPTA1P02549 2419 aa2.77□□□□□ -1.97
ECHDC1-222ENST00000531967 MT3P25713 68 aa2.77□□□□□ -1.97
ECHDC1-222ENST00000531967 CEP295Q9C0D2 2601 aa2.77□□□□□ -1.97
ECHDC1-222ENST00000531967 LINC00472Q9H8W2 130 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms