RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PRO3102Q9H379 93 aa0.94□□□□□ -2.26
AC055878.1-201ENST00000531858 URB1O60287 2271 aaKnown RBP0.94□□□□□ -2.26
AC055878.1-201ENST00000531858 ABCA6Q8N139 1617 aa0.93□□□□□ -2.26
AC055878.1-201ENST00000531858 CACNA1EQ15878 2313 aa0.93□□□□□ -2.26
AC055878.1-201ENST00000531858 PRH1P02810 166 aa0.93□□□□□ -2.26
AC055878.1-201ENST00000531858 SMR3AQ99954 134 aa0.93□□□□□ -2.26
AC055878.1-201ENST00000531858 MEGF8Q7Z7M0 2845 aa0.93□□□□□ -2.26
AC055878.1-201ENST00000531858 PLXNC1O60486 1568 aa0.92□□□□□ -2.26
AC055878.1-201ENST00000531858 K7EMI3 77 aa0.92□□□□□ -2.26
AC055878.1-201ENST00000531858 SPINK1P00995 79 aa0.92□□□□□ -2.26
AC055878.1-201ENST00000531858 PREX2Q70Z35 1606 aa0.92□□□□□ -2.26
AC055878.1-201ENST00000531858 KRTAP2-3P0C7H8 128 aa0.91□□□□□ -2.26
AC055878.1-201ENST00000531858 KRTAP2-4Q9BYR9 128 aa0.91□□□□□ -2.26
AC055878.1-201ENST00000531858 KRTAP2-1Q9BYU5 128 aa0.91□□□□□ -2.26
AC055878.1-201ENST00000531858 FXYD6Q9H0Q3 95 aa0.91□□□□□ -2.26
AC055878.1-201ENST00000531858 DEPDC5O75140 1603 aa0.9□□□□□ -2.26
AC055878.1-201ENST00000531858 NRAPQ86VF7 1730 aa0.9□□□□□ -2.27
AC055878.1-201ENST00000531858 SERF2P84101 59 aa0.9□□□□□ -2.27
AC055878.1-201ENST00000531858 WFDC13Q8IUB5 93 aa0.9□□□□□ -2.27
AC055878.1-201ENST00000531858 PRXQ9BXM0 1461 aa0.89□□□□□ -2.27
AC055878.1-201ENST00000531858 LINC00158P58513 81 aa0.89□□□□□ -2.27
AC055878.1-201ENST00000531858 SPTBN2O15020 2390 aa0.89□□□□□ -2.27
AC055878.1-201ENST00000531858 C2CD3Q4AC94 2353 aa0.88□□□□□ -2.27
AC055878.1-201ENST00000531858 LYNX1G3V0Z9 82 aa0.88□□□□□ -2.27
AC055878.1-201ENST00000531858 LELP1Q5T871 98 aa0.88□□□□□ -2.27
AC055878.1-201ENST00000531858 DDX60LQ5H9U9 1706 aaKnown RBP0.88□□□□□ -2.27
AC055878.1-201ENST00000531858 ALS2Q96Q42 1657 aa0.88□□□□□ -2.27
AC055878.1-201ENST00000531858 KLK9Q2XQG4 91 aa0.87□□□□□ -2.27
AC055878.1-201ENST00000531858 C3P01024 1663 aa0.87□□□□□ -2.27
AC055878.1-201ENST00000531858 PTPRZ1P23471 2315 aaPredicted RBP0.87□□□□□ -2.27
AC055878.1-201ENST00000531858 CRIP1P50238 77 aa0.86□□□□□ -2.27
AC055878.1-201ENST00000531858 NMES1Q9C002 83 aa0.86□□□□□ -2.27
AC055878.1-201ENST00000531858 GLI2P10070 1586 aa0.86□□□□□ -2.27
AC055878.1-201ENST00000531858 CPS1P31327 1500 aa0.85□□□□□ -2.27
AC055878.1-201ENST00000531858 H0YAA0 97 aa0.85□□□□□ -2.27
AC055878.1-201ENST00000531858 USF3Q68DE3 2245 aa0.85□□□□□ -2.27
AC055878.1-201ENST00000531858 PIEZO2Q9H5I5 2752 aa0.85□□□□□ -2.27
AC055878.1-201ENST00000531858 PTPRQQ9UMZ3 2332 aa0.84□□□□□ -2.27
AC055878.1-201ENST00000531858 U3KQA8 63 aa0.84□□□□□ -2.27
AC055878.1-201ENST00000531858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.84□□□□□ -2.28
AC055878.1-201ENST00000531858 ABCA12Q86UK0 2595 aa0.84□□□□□ -2.28
AC055878.1-201ENST00000531858 NCBP2-AS2Q69YL0 99 aa0.83□□□□□ -2.28
AC055878.1-201ENST00000531858 POLQO75417 2590 aa0.83□□□□□ -2.28
AC055878.1-201ENST00000531858 SYCP2Q9BX26 1530 aa0.82□□□□□ -2.28
AC055878.1-201ENST00000531858 LY75O60449 1722 aa0.81□□□□□ -2.28
AC055878.1-201ENST00000531858 TJP1Q07157 1748 aa0.81□□□□□ -2.28
AC055878.1-201ENST00000531858 FBN3Q75N90 2809 aa0.81□□□□□ -2.28
AC055878.1-201ENST00000531858 PLCE1Q9P212 2302 aa0.81□□□□□ -2.28
AC055878.1-201ENST00000531858 KIAA0586Q9BVV6 1533 aa0.8□□□□□ -2.28
AC055878.1-201ENST00000531858 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
AC055878.1-201ENST00000531858 DOPEY2Q9Y3R5 2298 aa0.8□□□□□ -2.28
AC055878.1-201ENST00000531858 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
AC055878.1-201ENST00000531858 BDP1A6H8Y1 2624 aa0.79□□□□□ -2.28
AC055878.1-201ENST00000531858 FCER1GP30273 86 aa0.79□□□□□ -2.28
AC055878.1-201ENST00000531858 C4AP0C0L4 1744 aa0.78□□□□□ -2.28
AC055878.1-201ENST00000531858 C4BP0C0L5 1744 aa0.78□□□□□ -2.28
AC055878.1-201ENST00000531858 IGIPA6NJ69 53 aa0.78□□□□□ -2.28
AC055878.1-201ENST00000531858 TNCP24821 2201 aa0.78□□□□□ -2.28
AC055878.1-201ENST00000531858 ADCY10Q96PN6 1610 aa0.78□□□□□ -2.29
AC055878.1-201ENST00000531858 FBN2P35556 2912 aa0.77□□□□□ -2.29
AC055878.1-201ENST00000531858 M0R1W7 72 aa0.77□□□□□ -2.29
AC055878.1-201ENST00000531858 KIF1AQ12756 1690 aa0.77□□□□□ -2.29
AC055878.1-201ENST00000531858 CELSR2Q9HCU4 2923 aa0.77□□□□□ -2.29
AC055878.1-201ENST00000531858 UGGT1Q9NYU2 1555 aa0.76□□□□□ -2.29
AC055878.1-201ENST00000531858 CNOT1A5YKK6 2376 aaKnown RBP0.76□□□□□ -2.29
AC055878.1-201ENST00000531858 TPRP12270 2363 aaKnown RBP0.76□□□□□ -2.29
AC055878.1-201ENST00000531858 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
AC055878.1-201ENST00000531858 FANCD2Q9BXW9 1451 aa0.75□□□□□ -2.29
AC055878.1-201ENST00000531858 IAPPP10997 89 aa0.75□□□□□ -2.29
AC055878.1-201ENST00000531858 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
AC055878.1-201ENST00000531858 CLASP1Q7Z460 1538 aa0.74□□□□□ -2.29
AC055878.1-201ENST00000531858 SPTBN1Q01082 2364 aaKnown RBP0.74□□□□□ -2.29
AC055878.1-201ENST00000531858 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
AC055878.1-201ENST00000531858 F8P00451 2351 aa0.73□□□□□ -2.29
AC055878.1-201ENST00000531858 DEFB130BP0DP73 79 aa0.73□□□□□ -2.29
AC055878.1-201ENST00000531858 DEFB130AP0DP74 79 aa0.73□□□□□ -2.29
AC055878.1-201ENST00000531858 LOC730098B7Z3J9 87 aa0.72□□□□□ -2.29
AC055878.1-201ENST00000531858 MINOS1Q5TGZ0 78 aa0.72□□□□□ -2.29
AC055878.1-201ENST00000531858 MROH2AA6NES4 1674 aa0.72□□□□□ -2.29
AC055878.1-201ENST00000531858 SNRPGP15A8MWD9 76 aa0.71□□□□□ -2.3
AC055878.1-201ENST00000531858 M0R2T5 61 aa0.71□□□□□ -2.3
AC055878.1-201ENST00000531858 CROCC2H7BZ55 1655 aa0.71□□□□□ -2.3
AC055878.1-201ENST00000531858 TENM4Q6N022 2769 aa0.71□□□□□ -2.3
AC055878.1-201ENST00000531858 H0YGX0 51 aa0.7□□□□□ -2.3
AC055878.1-201ENST00000531858 PKDREJQ9NTG1 2253 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 PLNP26678 52 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 CMC2Q9NRP2 79 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 TMEM167BQ9NRX6 74 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 C6orf48Q9UBA6 75 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 ZNF292O60281 2723 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 CHD9Q3L8U1 2897 aa0.69□□□□□ -2.3
AC055878.1-201ENST00000531858 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
AC055878.1-201ENST00000531858 AKAP6Q13023 2319 aa0.68□□□□□ -2.3
AC055878.1-201ENST00000531858 DEFB135Q30KP9 77 aa0.68□□□□□ -2.3
AC055878.1-201ENST00000531858 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
AC055878.1-201ENST00000531858 ITSN2Q9NZM3 1697 aa0.66□□□□□ -2.3
AC055878.1-201ENST00000531858 ANK2Q01484 3957 aa0.66□□□□□ -2.3
AC055878.1-201ENST00000531858 APCP25054 2843 aa0.65□□□□□ -2.3
AC055878.1-201ENST00000531858 RPS27P42677 84 aaKnown RBP0.65□□□□□ -2.31
AC055878.1-201ENST00000531858 RPS27LQ71UM5 84 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms