RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
USP47-211ENST00000531513 KCNQ1DNQ9H478 68 aa0.72□□□□□ -2.29
USP47-211ENST00000531513 SMIM5Q71RC9 77 aa0.71□□□□□ -2.3
USP47-211ENST00000531513 APCP25054 2843 aa0.71□□□□□ -2.3
USP47-211ENST00000531513 POLQO75417 2590 aa0.71□□□□□ -2.3
USP47-211ENST00000531513 NESP48681 1621 aa0.71□□□□□ -2.3
USP47-211ENST00000531513 TSC2P49815 1807 aa0.71□□□□□ -2.3
USP47-211ENST00000531513 PRO3102Q9H379 93 aa0.7□□□□□ -2.3
USP47-211ENST00000531513 THOC2Q8NI27 1593 aaKnown RBP0.7□□□□□ -2.3
USP47-211ENST00000531513 RICTORQ6R327 1708 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
USP47-211ENST00000531513 TNRC6CQ9HCJ0 1690 aaKnown RBP0.69□□□□□ -2.3
USP47-211ENST00000531513 NDUFA3O95167 84 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 ITSN1Q15811 1721 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 CACNA1EQ15878 2313 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 WIZO95785 1651 aa0.69□□□□□ -2.3
USP47-211ENST00000531513 CCDC180Q9P1Z9 1646 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 KLK9Q2XQG4 91 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 PARP4Q9UKK3 1724 aaKnown RBP0.68□□□□□ -2.3
USP47-211ENST00000531513 U3KQA8 63 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 C2CD3Q4AC94 2353 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
USP47-211ENST00000531513 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 USF3Q68DE3 2245 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 ETDCA0A1B0GVM5 59 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 LINC01549A6NIU2 74 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 SFTA3P0C7M3 94 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 WFDC13Q8IUB5 93 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 PIEZO2Q9H5I5 2752 aa0.67□□□□□ -2.3
USP47-211ENST00000531513 TIAM1Q13009 1591 aa0.66□□□□□ -2.3
USP47-211ENST00000531513 ABCA12Q86UK0 2595 aa0.66□□□□□ -2.3
USP47-211ENST00000531513 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
USP47-211ENST00000531513 PTPRZ1P23471 2315 aaPredicted RBP0.65□□□□□ -2.3
USP47-211ENST00000531513 PTPRQQ9UMZ3 2332 aa0.65□□□□□ -2.3
USP47-211ENST00000531513 LINC00158P58513 81 aa0.65□□□□□ -2.31
USP47-211ENST00000531513 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
USP47-211ENST00000531513 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
USP47-211ENST00000531513 DDX60LQ5H9U9 1706 aaKnown RBP0.64□□□□□ -2.31
USP47-211ENST00000531513 LELP1Q5T871 98 aa0.64□□□□□ -2.31
USP47-211ENST00000531513 TNCP24821 2201 aa0.64□□□□□ -2.31
USP47-211ENST00000531513 K7EMI3 77 aa0.63□□□□□ -2.31
USP47-211ENST00000531513 DEPDC5O75140 1603 aa0.63□□□□□ -2.31
USP47-211ENST00000531513 TPRP12270 2363 aaKnown RBP0.62□□□□□ -2.31
USP47-211ENST00000531513 NRAPQ86VF7 1730 aa0.62□□□□□ -2.31
USP47-211ENST00000531513 SERF2P84101 59 aa0.62□□□□□ -2.31
USP47-211ENST00000531513 RNF17Q9BXT8 1623 aaKnown RBP0.62□□□□□ -2.31
USP47-211ENST00000531513 ABCC6O95255 1503 aa0.61□□□□□ -2.31
USP47-211ENST00000531513 ABCA10Q8WWZ4 1543 aa0.61□□□□□ -2.31
USP47-211ENST00000531513 LYNX1G3V0Z9 82 aa0.61□□□□□ -2.31
USP47-211ENST00000531513 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
USP47-211ENST00000531513 CHD9Q3L8U1 2897 aa0.61□□□□□ -2.31
USP47-211ENST00000531513 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
USP47-211ENST00000531513 CRIP1P50238 77 aa0.6□□□□□ -2.31
USP47-211ENST00000531513 EEA1Q15075 1411 aa0.6□□□□□ -2.31
USP47-211ENST00000531513 PLXNC1O60486 1568 aa0.6□□□□□ -2.31
USP47-211ENST00000531513 ABCA6Q8N139 1617 aa0.6□□□□□ -2.31
USP47-211ENST00000531513 ZNF292O60281 2723 aa0.59□□□□□ -2.31
USP47-211ENST00000531513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.31
USP47-211ENST00000531513 NMES1Q9C002 83 aa0.59□□□□□ -2.31
USP47-211ENST00000531513 F8P00451 2351 aa0.59□□□□□ -2.32
USP47-211ENST00000531513 LOC730098B7Z3J9 87 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 H0YAA0 97 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 NCBP2-AS2Q69YL0 99 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 C4AP0C0L4 1744 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 C4BP0C0L5 1744 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 TJP1Q07157 1748 aa0.58□□□□□ -2.32
USP47-211ENST00000531513 C3P01024 1663 aa0.57□□□□□ -2.32
USP47-211ENST00000531513 TENM4Q6N022 2769 aa0.56□□□□□ -2.32
USP47-211ENST00000531513 MAST1Q9Y2H9 1570 aa0.56□□□□□ -2.32
USP47-211ENST00000531513 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
USP47-211ENST00000531513 PRXQ9BXM0 1461 aa0.55□□□□□ -2.32
USP47-211ENST00000531513 KIAA0586Q9BVV6 1533 aa0.55□□□□□ -2.32
USP47-211ENST00000531513 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
USP47-211ENST00000531513 ALS2Q96Q42 1657 aa0.55□□□□□ -2.32
USP47-211ENST00000531513 CPS1P31327 1500 aa0.54□□□□□ -2.32
USP47-211ENST00000531513 CNOT1A5YKK6 2376 aaKnown RBP0.54□□□□□ -2.32
USP47-211ENST00000531513 FCER1GP30273 86 aa0.54□□□□□ -2.32
USP47-211ENST00000531513 ANK2Q01484 3957 aa0.54□□□□□ -2.32
USP47-211ENST00000531513 M0R2T5 61 aa0.53□□□□□ -2.32
USP47-211ENST00000531513 IAPPP10997 89 aa0.53□□□□□ -2.32
USP47-211ENST00000531513 PREX2Q70Z35 1606 aa0.53□□□□□ -2.33
USP47-211ENST00000531513 USP24Q9UPU5 2620 aa0.52□□□□□ -2.33
USP47-211ENST00000531513 AKAP6Q13023 2319 aa0.52□□□□□ -2.33
USP47-211ENST00000531513 ZFYVE26Q68DK2 2539 aa0.52□□□□□ -2.33
USP47-211ENST00000531513 GLI2P10070 1586 aa0.52□□□□□ -2.33
USP47-211ENST00000531513 CSMD3Q7Z407 3707 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 M0R1W7 72 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 LY75O60449 1722 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 DEFB130BP0DP73 79 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 DEFB130AP0DP74 79 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 DEFB135Q30KP9 77 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 MINOS1Q5TGZ0 78 aa0.51□□□□□ -2.33
USP47-211ENST00000531513 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
USP47-211ENST00000531513 COL6A3P12111 3177 aa0.5□□□□□ -2.33
USP47-211ENST00000531513 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
USP47-211ENST00000531513 H0YGG7 62 aa0.49□□□□□ -2.33
USP47-211ENST00000531513 KIF1AQ12756 1690 aa0.49□□□□□ -2.33
USP47-211ENST00000531513 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms