RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
NEDD8-206ENST00000531430 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
NEDD8-206ENST00000531430 TRAV12-1A0A0B4J245 112 aa4.93□□□□□ -1.62
NEDD8-206ENST00000531430 TAL2Q16559 108 aa4.93□□□□□ -1.62
NEDD8-206ENST00000531430 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
NEDD8-206ENST00000531430 OR13C6PQ8NH95 151 aa4.93□□□□□ -1.62
NEDD8-206ENST00000531430 Q1RN00 199 aa4.92□□□□□ -1.62
NEDD8-206ENST00000531430 COMMD7Q86VX2 200 aa4.92□□□□□ -1.62
NEDD8-206ENST00000531430 LEPROTO15243 131 aa4.91□□□□□ -1.62
NEDD8-206ENST00000531430 TSPEAR-AS2P59090 65 aa4.9□□□□□ -1.63
NEDD8-206ENST00000531430 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
NEDD8-206ENST00000531430 RHEBQ15382 184 aa4.9□□□□□ -1.63
NEDD8-206ENST00000531430 CLLU1Q5K131 121 aa4.9□□□□□ -1.63
NEDD8-206ENST00000531430 UQCC3Q6UW78 93 aa4.9□□□□□ -1.63
NEDD8-206ENST00000531430 PRO1933Q9H354 126 aa4.9□□□□□ -1.63
NEDD8-206ENST00000531430 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 C5orf52A6NGY3 159 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 J3QQQ9 107 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 NDUFC2O95298 119 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
NEDD8-206ENST00000531430 IFITM2Q01629 132 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
NEDD8-206ENST00000531430 A0A0G2JQZ4 141 aa4.88□□□□□ -1.63
NEDD8-206ENST00000531430 C1orf195Q5TG92 126 aa4.88□□□□□ -1.63
NEDD8-206ENST00000531430 CHCHD1Q96BP2 118 aaKnown RBP4.88□□□□□ -1.63
NEDD8-206ENST00000531430 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
NEDD8-206ENST00000531430 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
NEDD8-206ENST00000531430 HSBP1O75506 76 aa4.87□□□□□ -1.63
NEDD8-206ENST00000531430 SPRR1BP22528 89 aa4.87□□□□□ -1.63
NEDD8-206ENST00000531430 AKR1D1P51857 326 aa4.87□□□□□ -1.63
NEDD8-206ENST00000531430 HERVK_113P61574 105 aa4.87□□□□□ -1.63
NEDD8-206ENST00000531430 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
NEDD8-206ENST00000531430 EIF4EBP3O60516 100 aaPredicted RBP4.86□□□□□ -1.63
NEDD8-206ENST00000531430 COX7BP24311 80 aa4.86□□□□□ -1.63
NEDD8-206ENST00000531430 CD164Q04900 197 aa4.86□□□□□ -1.63
NEDD8-206ENST00000531430 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
NEDD8-206ENST00000531430 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
NEDD8-206ENST00000531430 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
NEDD8-206ENST00000531430 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 NMUP48645 174 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 ATP11AUNQ6ZP68 121 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
NEDD8-206ENST00000531430 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 DPM2O94777 84 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 FABP4P15090 132 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 PLNP26678 52 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 C6orf99Q4VX62 202 aa4.83□□□□□ -1.64
NEDD8-206ENST00000531430 TCL1BO95988 128 aa4.82□□□□□ -1.64
NEDD8-206ENST00000531430 NDUFA5Q16718 116 aa4.82□□□□□ -1.64
NEDD8-206ENST00000531430 USH2AO75445 5202 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 IGKCP01834 107 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 APOC3P02656 99 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 CFC1P0CG37 223 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 SPANXCQ9NY87 97 aa4.81□□□□□ -1.64
NEDD8-206ENST00000531430 ELOF1P60002 83 aaKnown RBP4.8□□□□□ -1.64
NEDD8-206ENST00000531430 C10orf91Q5T1B1 145 aa4.8□□□□□ -1.64
NEDD8-206ENST00000531430 Q5XG85 94 aa4.8□□□□□ -1.64
NEDD8-206ENST00000531430 C20orf202A1L168 122 aa4.79□□□□□ -1.64
NEDD8-206ENST00000531430 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
NEDD8-206ENST00000531430 HSPB8Q9UJY1 196 aa4.79□□□□□ -1.64
NEDD8-206ENST00000531430 OBSCN-AS1Q96MR7 158 aa4.78□□□□□ -1.64
NEDD8-206ENST00000531430 SERF1AO75920 110 aa4.77□□□□□ -1.65
NEDD8-206ENST00000531430 S100A1P23297 94 aa4.77□□□□□ -1.65
NEDD8-206ENST00000531430 LINC00518Q8N0U6 118 aa4.77□□□□□ -1.65
NEDD8-206ENST00000531430 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
NEDD8-206ENST00000531430 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
NEDD8-206ENST00000531430 A6NDN8 102 aa4.76□□□□□ -1.65
NEDD8-206ENST00000531430 E9PLD3 99 aa4.76□□□□□ -1.65
NEDD8-206ENST00000531430 F8WEM9 126 aa4.76□□□□□ -1.65
NEDD8-206ENST00000531430 SNAPINO95295 136 aa4.76□□□□□ -1.65
NEDD8-206ENST00000531430 TRGC2P03986 189 aa4.75□□□□□ -1.65
NEDD8-206ENST00000531430 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
NEDD8-206ENST00000531430 Q96NJ1 140 aa4.75□□□□□ -1.65
NEDD8-206ENST00000531430 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
NEDD8-206ENST00000531430 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
NEDD8-206ENST00000531430 SVBPQ8N300 66 aa4.74□□□□□ -1.65
NEDD8-206ENST00000531430 LITAFQ99732 161 aa4.74□□□□□ -1.65
NEDD8-206ENST00000531430 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
NEDD8-206ENST00000531430 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
NEDD8-206ENST00000531430 SLC7A5P1Q8MH63 180 aa4.73□□□□□ -1.65
NEDD8-206ENST00000531430 TRBV7-6A0A0J9YX20 115 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 FAM236DA0A1B0GTK5 79 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 TIMM17BO60830 172 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 FAM236CP0DP71 79 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 LINC00310P59036 64 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 Q75L30 129 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 TTTY13Q9BZ97 58 aa4.72□□□□□ -1.65
NEDD8-206ENST00000531430 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
NEDD8-206ENST00000531430 YPEL4Q96NS1 127 aa4.71□□□□□ -1.66
NEDD8-206ENST00000531430 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
NEDD8-206ENST00000531430 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
NEDD8-206ENST00000531430 SCGB1D4Q6XE38 83 aa4.7□□□□□ -1.66
NEDD8-206ENST00000531430 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
NEDD8-206ENST00000531430 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
NEDD8-206ENST00000531430 A4D1N5 150 aa4.69□□□□□ -1.66
NEDD8-206ENST00000531430 MT2AP02795 61 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms