RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
SCN3B-206ENST00000530277 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
SCN3B-206ENST00000530277 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
SCN3B-206ENST00000530277 ZFHX3Q15911 3703 aa8.32□□□□□ -1.08
SCN3B-206ENST00000530277 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
SCN3B-206ENST00000530277 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
SCN3B-206ENST00000530277 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
SCN3B-206ENST00000530277 IGLV9-49A0A0B4J1Y8 123 aa8.31□□□□□ -1.08
SCN3B-206ENST00000530277 KRTAP10-11P60412 298 aa8.31□□□□□ -1.08
SCN3B-206ENST00000530277 TENM4Q6N022 2769 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 Q6ZRP5 223 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 ATP5EP2Q5VTU8 51 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 SPINK6Q6UWN8 80 aa8.3□□□□□ -1.08
SCN3B-206ENST00000530277 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
SCN3B-206ENST00000530277 OTOGQ6ZRI0 2925 aa8.28□□□□□ -1.08
SCN3B-206ENST00000530277 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
SCN3B-206ENST00000530277 CRYGAP11844 174 aa8.27□□□□□ -1.09
SCN3B-206ENST00000530277 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
SCN3B-206ENST00000530277 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
SCN3B-206ENST00000530277 A0A087WSZ3 146 aa8.26□□□□□ -1.09
SCN3B-206ENST00000530277 CASC10Q5T4H9 136 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
SCN3B-206ENST00000530277 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
SCN3B-206ENST00000530277 H3BQ85 93 aa8.24□□□□□ -1.09
SCN3B-206ENST00000530277 MP68P56378 58 aa8.24□□□□□ -1.09
SCN3B-206ENST00000530277 SPTSSBQ8NFR3 76 aa8.24□□□□□ -1.09
SCN3B-206ENST00000530277 VPS13CQ709C8 3753 aa8.24□□□□□ -1.09
SCN3B-206ENST00000530277 C1orf195Q5TG92 126 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 Q8NDZ9 215 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 LINC00474Q9P2X8 69 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 V9GYY9 64 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 Q6ZQT0 140 aa8.23□□□□□ -1.09
SCN3B-206ENST00000530277 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 NDUFB1O75438 58 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 VPREB1P12018 145 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
SCN3B-206ENST00000530277 LY6G6CO95867 125 aa8.21□□□□□ -1.09
SCN3B-206ENST00000530277 PSPHP1O15172 72 aa8.21□□□□□ -1.1
SCN3B-206ENST00000530277 LINC00612Q8N6U2 182 aa8.2□□□□□ -1.1
SCN3B-206ENST00000530277 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
SCN3B-206ENST00000530277 TM2D3Q9BRN9 247 aa8.2□□□□□ -1.1
SCN3B-206ENST00000530277 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
SCN3B-206ENST00000530277 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
SCN3B-206ENST00000530277 IGLV6-57P01721 117 aa8.19□□□□□ -1.1
SCN3B-206ENST00000530277 IGKV4-1P06312 121 aa8.18□□□□□ -1.1
SCN3B-206ENST00000530277 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
SCN3B-206ENST00000530277 Q9BRP9 147 aa8.17□□□□□ -1.1
SCN3B-206ENST00000530277 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
SCN3B-206ENST00000530277 SMIM26A0A096LP01 95 aa8.17□□□□□ -1.1
SCN3B-206ENST00000530277 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
SCN3B-206ENST00000530277 TRBV7-6A0A0J9YX20 115 aa8.16□□□□□ -1.1
SCN3B-206ENST00000530277 C14orf177Q52M58 125 aa8.16□□□□□ -1.1
SCN3B-206ENST00000530277 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
SCN3B-206ENST00000530277 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
SCN3B-206ENST00000530277 SMIM29Q86T20 159 aa8.15□□□□□ -1.1
SCN3B-206ENST00000530277 TMEM254Q8TBM7 123 aa8.15□□□□□ -1.1
SCN3B-206ENST00000530277 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
SCN3B-206ENST00000530277 DNAH10OSP0CZ25 163 aa8.13□□□□□ -1.11
SCN3B-206ENST00000530277 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
SCN3B-206ENST00000530277 OXTP01178 125 aa8.12□□□□□ -1.11
SCN3B-206ENST00000530277 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
SCN3B-206ENST00000530277 K7EIL1 84 aa8.12□□□□□ -1.11
SCN3B-206ENST00000530277 Q6ZRX8 168 aa8.11□□□□□ -1.11
SCN3B-206ENST00000530277 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
SCN3B-206ENST00000530277 MDFIQ99750 246 aa8.1□□□□□ -1.11
SCN3B-206ENST00000530277 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
SCN3B-206ENST00000530277 PCOTHQ58A44 107 aa8.1□□□□□ -1.11
SCN3B-206ENST00000530277 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
SCN3B-206ENST00000530277 PRYO14603 147 aa8.09□□□□□ -1.11
SCN3B-206ENST00000530277 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
SCN3B-206ENST00000530277 LINC00476Q8WZB0 136 aa8.09□□□□□ -1.11
SCN3B-206ENST00000530277 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
SCN3B-206ENST00000530277 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
SCN3B-206ENST00000530277 SEC61GP60059 68 aa8.08□□□□□ -1.12
SCN3B-206ENST00000530277 Q8N377 158 aa8.07□□□□□ -1.12
SCN3B-206ENST00000530277 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
SCN3B-206ENST00000530277 H3BNG1 76 aa8.06□□□□□ -1.12
SCN3B-206ENST00000530277 CXCL6P80162 114 aa8.06□□□□□ -1.12
SCN3B-206ENST00000530277 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
SCN3B-206ENST00000530277 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
SCN3B-206ENST00000530277 CASC2Q6XLA1 102 aa8.04□□□□□ -1.12
SCN3B-206ENST00000530277 K7EQZ3 153 aa8.03□□□□□ -1.12
SCN3B-206ENST00000530277 PMAIP1Q13794 54 aa8.03□□□□□ -1.12
SCN3B-206ENST00000530277 Q8NBF4 154 aa8.03□□□□□ -1.12
SCN3B-206ENST00000530277 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
SCN3B-206ENST00000530277 H7BZZ5 65 aa8.02□□□□□ -1.13
SCN3B-206ENST00000530277 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 Q5XG85 94 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 HCG22E2RYF7 251 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms