RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 CSMD1Q96PZ7 3565 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 UNC13CQ8NB66 2214 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 ABCA4P78363 2273 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 NAV3Q8IVL0 2385 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 FBN3Q75N90 2809 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 SPENQ96T58 3664 aaKnown RBP1.28□□□□□ -2.2
SVIP-203ENST00000529848 TRAV23DV6A0A075B6W5 121 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 SPTY2D1-AS1A0A0U1RR47 76 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 H3BVH4 76 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 HMGN4O00479 90 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 LYNX1P0DP58 116 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 COX6B1P14854 86 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 IFI27P40305 119 aaPredicted RBP1.28□□□□□ -2.2
SVIP-203ENST00000529848 DEFB109BQ30KR1 87 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 PSMG4Q5JS54 123 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 DNAJC13O75165 2243 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 SPG11Q96JI7 2443 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 FLNCQ14315 2725 aa1.28□□□□□ -2.2
SVIP-203ENST00000529848 COL12A1Q99715 3063 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 RP1L1Q8IWN7 2480 aaPredicted RBP1.27□□□□□ -2.21
SVIP-203ENST00000529848 ARFGEF3Q5TH69 2177 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 IGKV3-7A0A075B6H7 116 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 TRBV6-8A0A0A6YYG3 113 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 TRBV10-1A0A0K0K1A3 114 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 ZNF815PA8K554 130 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 IGHV3-33P01772 117 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 PRR15LQ9BU68 103 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 GNG13Q9P2W3 67 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 SNURFQ9Y675 71 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 CCDC168Q8NDH2 2452 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 CACNA1CQ13936 2221 aa1.27□□□□□ -2.21
SVIP-203ENST00000529848 ITPR2Q14571 2701 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 PKDREJQ9NTG1 2253 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 BOD1L1Q8NFC6 3051 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 A0A087WVE0 104 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 NUPR2A6NF83 97 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 CNBPP62633 177 aaKnown RBP1.26□□□□□ -2.21
SVIP-203ENST00000529848 SSBP1Q04837 148 aaKnown RBP1.26□□□□□ -2.21
SVIP-203ENST00000529848 PDE6HQ13956 83 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 C1orf137Q5JT78 98 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 C10orf55Q5SWW7 151 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 TOMM5Q8N4H5 51 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 FDCSPQ8NFU4 85 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 NCOA6Q14686 2063 aaPredicted RBP1.26□□□□□ -2.21
SVIP-203ENST00000529848 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
SVIP-203ENST00000529848 SETD2Q9BYW2 2564 aaPredicted RBP1.25□□□□□ -2.21
SVIP-203ENST00000529848 MTORP42345 2549 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 ANKHD1Q8IWZ3 2542 aaKnown RBP1.25□□□□□ -2.21
SVIP-203ENST00000529848 A0A0J9YY99 117 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 LEPROTL1O95214 131 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 IGHV3-30P01768 117 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 SAA2P0DJI9 122 aaPredicted RBP1.25□□□□□ -2.21
SVIP-203ENST00000529848 IGHV3-30-5P0DP03 117 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 ATP5EP2Q5VTU8 51 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 C2orf82Q6UX34 121 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 PPP1R1CQ8WVI7 109 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 PLAC8Q9NZF1 115 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 MRPL36Q9P0J6 103 aaKnown RBP1.25□□□□□ -2.21
SVIP-203ENST00000529848 LENEPQ9Y5L5 61 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 HIVEP1P15822 2718 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 AKAP9Q99996 3911 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 DNHD1Q96M86 4753 aa1.25□□□□□ -2.21
SVIP-203ENST00000529848 UTP20O75691 2785 aaKnown RBP1.25□□□□□ -2.21
SVIP-203ENST00000529848 CSPG4Q6UVK1 2322 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 ADGRG4Q8IZF6 3080 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 CSMD2Q7Z408 3487 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 INTS1Q8N201 2190 aaKnown RBP1.24□□□□□ -2.21
SVIP-203ENST00000529848 LRBAP50851 2863 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 LINC01549A6NIU2 74 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 HIGD1CA8MV81 97 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 K7EMI3 77 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 PPP1R17O96001 155 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 IFI6P09912 130 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 ELOF1P60002 83 aaKnown RBP1.24□□□□□ -2.21
SVIP-203ENST00000529848 ATXN8Q156A1 80 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 SMIM4Q8WVI0 70 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 PATE1Q8WXA2 126 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
SVIP-203ENST00000529848 NF1P21359 2839 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 APCP25054 2843 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CELSR1Q9NYQ6 3014 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CENPEQ02224 2701 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 A0A087WTM6 91 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 D6R8Y8 96 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 M0R3E3 92 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 PPYP01298 95 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 IGLV3-1P01715 115 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CCL3L1P16619 93 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CCL18P55774 89 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 FAM74A4Q5TZK3 123 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 MUSTN1Q8IVN3 82 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 NMES1Q9C002 83 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CMC2Q9NRP2 79 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 PDZD2O15018 2839 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms