RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 USH2AO75445 5202 aa6.97□□□□□ -1.29
CLNS1A-207ENST00000527133 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
CLNS1A-207ENST00000527133 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-207ENST00000527133 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
CLNS1A-207ENST00000527133 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
CLNS1A-207ENST00000527133 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
CLNS1A-207ENST00000527133 LINC00614P0C842 121 aa6.94□□□□□ -1.3
CLNS1A-207ENST00000527133 HERV-K104P63124 156 aa6.94□□□□□ -1.3
CLNS1A-207ENST00000527133 JOSD1Q15040 202 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-207ENST00000527133 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
CLNS1A-207ENST00000527133 TRBV10-2A0A0K0K1G8 114 aa6.92□□□□□ -1.3
CLNS1A-207ENST00000527133 COLCA2A8K830 154 aa6.92□□□□□ -1.3
CLNS1A-207ENST00000527133 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
CLNS1A-207ENST00000527133 A0A1B0GV90 55 aa6.91□□□□□ -1.3
CLNS1A-207ENST00000527133 RHEBQ15382 184 aa6.91□□□□□ -1.3
CLNS1A-207ENST00000527133 COX19Q49B96 90 aa6.91□□□□□ -1.3
CLNS1A-207ENST00000527133 C18orf32Q8TCD1 76 aa6.91□□□□□ -1.3
CLNS1A-207ENST00000527133 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
CLNS1A-207ENST00000527133 PCP4P48539 62 aa6.9□□□□□ -1.3
CLNS1A-207ENST00000527133 S100A7L2Q5SY68 101 aa6.9□□□□□ -1.3
CLNS1A-207ENST00000527133 SPANXB1Q9NS25 103 aaPredicted RBP6.9□□□□□ -1.3
CLNS1A-207ENST00000527133 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
CLNS1A-207ENST00000527133 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
CLNS1A-207ENST00000527133 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
CLNS1A-207ENST00000527133 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
CLNS1A-207ENST00000527133 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
CLNS1A-207ENST00000527133 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
CLNS1A-207ENST00000527133 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
CLNS1A-207ENST00000527133 RPS10P5Q9NQ39 176 aa6.87□□□□□ -1.31
CLNS1A-207ENST00000527133 H7C2G1 150 aa6.86□□□□□ -1.31
CLNS1A-207ENST00000527133 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
CLNS1A-207ENST00000527133 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
CLNS1A-207ENST00000527133 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
CLNS1A-207ENST00000527133 SPRR1BP22528 89 aa6.85□□□□□ -1.31
CLNS1A-207ENST00000527133 TSPEAR-AS2P59090 65 aa6.85□□□□□ -1.31
CLNS1A-207ENST00000527133 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CLNS1A-207ENST00000527133 IFI27L1Q96BM0 104 aa6.85□□□□□ -1.31
CLNS1A-207ENST00000527133 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
CLNS1A-207ENST00000527133 NDUFC2O95298 119 aa6.84□□□□□ -1.31
CLNS1A-207ENST00000527133 Q6Q795 121 aa6.84□□□□□ -1.31
CLNS1A-207ENST00000527133 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
CLNS1A-207ENST00000527133 HINT1P49773 126 aaPredicted RBP6.83□□□□□ -1.32
CLNS1A-207ENST00000527133 C1orf195Q5TG92 126 aa6.83□□□□□ -1.32
CLNS1A-207ENST00000527133 M0R143 59 aa6.82□□□□□ -1.32
CLNS1A-207ENST00000527133 CD164Q04900 197 aa6.82□□□□□ -1.32
CLNS1A-207ENST00000527133 CFC1P0CG37 223 aa6.81□□□□□ -1.32
CLNS1A-207ENST00000527133 NPC2P61916 151 aa6.81□□□□□ -1.32
CLNS1A-207ENST00000527133 Q1RN00 199 aa6.81□□□□□ -1.32
CLNS1A-207ENST00000527133 PRO1933Q9H354 126 aa6.81□□□□□ -1.32
CLNS1A-207ENST00000527133 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
CLNS1A-207ENST00000527133 LEPROTO15243 131 aa6.8□□□□□ -1.32
CLNS1A-207ENST00000527133 DLEU1O43261 78 aa6.8□□□□□ -1.32
CLNS1A-207ENST00000527133 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
CLNS1A-207ENST00000527133 H0Y8G0 127 aa6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 Q5XG85 94 aa6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
CLNS1A-207ENST00000527133 J3QQQ9 107 aa6.78□□□□□ -1.32
CLNS1A-207ENST00000527133 DEFB105AQ8NG35 78 aa6.78□□□□□ -1.32
CLNS1A-207ENST00000527133 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
CLNS1A-207ENST00000527133 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
CLNS1A-207ENST00000527133 TAL2Q16559 108 aa6.77□□□□□ -1.33
CLNS1A-207ENST00000527133 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
CLNS1A-207ENST00000527133 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
CLNS1A-207ENST00000527133 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
CLNS1A-207ENST00000527133 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
CLNS1A-207ENST00000527133 HSBP1L1C9JCN9 74 aa6.75□□□□□ -1.33
CLNS1A-207ENST00000527133 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
CLNS1A-207ENST00000527133 NMUP48645 174 aa6.75□□□□□ -1.33
CLNS1A-207ENST00000527133 ADAMTSL4-AS1Q5T5F5 129 aa6.75□□□□□ -1.33
CLNS1A-207ENST00000527133 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
CLNS1A-207ENST00000527133 FABP4P15090 132 aa6.74□□□□□ -1.33
CLNS1A-207ENST00000527133 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HERVK_113P61574 105 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
CLNS1A-207ENST00000527133 COX7BP24311 80 aa6.72□□□□□ -1.33
CLNS1A-207ENST00000527133 PLNP26678 52 aa6.72□□□□□ -1.33
CLNS1A-207ENST00000527133 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
CLNS1A-207ENST00000527133 COA6Q5JTJ3 125 aaKnown RBP6.72□□□□□ -1.33
CLNS1A-207ENST00000527133 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
CLNS1A-207ENST00000527133 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
CLNS1A-207ENST00000527133 HSBP1O75506 76 aa6.71□□□□□ -1.34
CLNS1A-207ENST00000527133 COL5A1-AS1Q5SY13 56 aa6.71□□□□□ -1.34
CLNS1A-207ENST00000527133 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
CLNS1A-207ENST00000527133 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
CLNS1A-207ENST00000527133 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
CLNS1A-207ENST00000527133 SNHG12Q9BXW3 62 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms