RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NWD1Q149M9 1564 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 UBR1Q8IWV7 1749 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 FANCD2Q9BXW9 1451 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCA4P78363 2273 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 ALKQ9UM73 1620 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 TULP4Q9NRJ4 1543 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 PLCH1Q4KWH8 1693 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 CFAP43Q8NDM7 1665 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 ITSN2Q9NZM3 1697 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 LCE6AA0A183 80 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 H3BNG1 76 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 WT1-ASQ06250 92 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB123Q8N688 67 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 U3KQA8 63 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 MAP2P11137 1827 aaKnown RBP0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 MYO7BQ6PIF6 2116 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 CACNA1BQ00975 2339 aa0.35□□□□□ -2.35
ECHDC1-219ENST00000526299 SIPA1L3O60292 1781 aaPredicted RBP0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 PAPPA2Q9BXP8 1791 aa0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 ARFGEF2Q9Y6D5 1785 aa0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 F5P12259 2224 aa0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 TNRC6CQ9HCJ0 1690 aaKnown RBP0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 PLXNB2O15031 1838 aa0.34□□□□□ -2.35
ECHDC1-219ENST00000526299 IGLV5-48A0A075B6I7 105 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 NDUFA1O15239 70 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 RGPD1P0DJD0 1748 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 Q5VSD8 79 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 NRAPQ86VF7 1730 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 DOT1LQ8TEK3 1739 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 DNAJC13O75165 2243 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 NCOA6Q14686 2063 aaPredicted RBP0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 BCORQ6W2J9 1755 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 NHSL1Q5SYE7 1610 aa0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 RNF17Q9BXT8 1623 aaKnown RBP0.34□□□□□ -2.36
ECHDC1-219ENST00000526299 ZNF831Q5JPB2 1677 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 NHSQ6T4R5 1651 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 DDX60LQ5H9U9 1706 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ASCC3Q8N3C0 2202 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ABCC8Q09428 1581 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 IQGAP2Q13576 1575 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ZNF469Q96JG9 3925 aaPredicted RBP0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ABCA1O95477 2261 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 H0YAA0 97 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 H3BSH0 61 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 M0QY20 66 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 M0R2T5 61 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 SPART-AS1P0CW21 52 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 DEFB110Q30KQ9 67 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 LEAP2Q969E1 77 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 TTTY10Q9BZA0 68 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 S4R3F8 94 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 PREX2Q70Z35 1606 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ZFHX3Q15911 3703 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 CD163L1Q9NR16 1453 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 WIZO95785 1651 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ALS2Q96Q42 1657 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 FBN2P35556 2912 aa0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 KIAA0100Q14667 2235 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 POLR1AO95602 1720 aaPredicted RBP0.33□□□□□ -2.36
ECHDC1-219ENST00000526299 ANKRD36A6QL64 1941 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 GLI2P10070 1586 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 MAST1Q9Y2H9 1570 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 CICQ96RK0 1608 aaPredicted RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 ASH1LQ9NR48 2969 aaKnown RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 TSC2P49815 1807 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 LYNX1G3V0Z9 82 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 RPS27P42677 84 aaKnown RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 POLR2KP53803 58 aaKnown RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 DEFB131AP59861 70 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 SNRPGP62308 76 aaKnown RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 RPS27LQ71UM5 84 aaKnown RBP0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 CROCC2H7BZ55 1655 aa0.32□□□□□ -2.36
ECHDC1-219ENST00000526299 ADCY10Q96PN6 1610 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 MROH2AA6NES4 1674 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 RPL39P62891 51 aaKnown RBP0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 RPL39LQ96EH5 51 aaKnown RBP0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 CADP27708 2225 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 ASXL3Q9C0F0 2248 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 COL6A6A6NMZ7 2263 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 BIVM-ERCC5R4GMW8 1640 aa0.31□□□□□ -2.36
ECHDC1-219ENST00000526299 GOLGA4Q13439 2230 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 URB1O60287 2271 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 CACNA1EQ15878 2313 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 CNTRLQ7Z7A1 2325 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 TOP2AP11388 1531 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 LINC01546A6NGU7 62 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 ARHGAP5-AS1Q96IT6 56 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 DEPDC5O75140 1603 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 APCP25054 2843 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 C3P01024 1663 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 KIF1AQ12756 1690 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 LMO7Q8WWI1 1683 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 FAM208AQ9UK61 1670 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 LY75O60449 1722 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 C4AP0C0L4 1744 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 C4BP0C0L5 1744 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms