RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
HDAC9-227ENST00000523867 FBN3Q75N90 2809 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 DNAJC9-AS1A6NH13 148 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 WFDC10AQ9H1F0 79 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 JMJD1CQ15652 2540 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 PSPHP1O15172 72 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
HDAC9-227ENST00000523867 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
HDAC9-227ENST00000523867 CYP4F30PQ9H0H9 118 aa4.99□□□□□ -1.61
HDAC9-227ENST00000523867 LCE6AA0A183 80 aa4.99□□□□□ -1.61
HDAC9-227ENST00000523867 UBE2AP49459 152 aa4.99□□□□□ -1.61
HDAC9-227ENST00000523867 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
HDAC9-227ENST00000523867 LCE2BO14633 110 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 CSNK1G2-AS1Q8NCQ2 148 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 LINC00959A0A1B0GUT2 108 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 LINC00575Q6W349 94 aa4.98□□□□□ -1.61
HDAC9-227ENST00000523867 NANOS2P60321 138 aaKnown RBP4.97□□□□□ -1.61
HDAC9-227ENST00000523867 DEFB130BP0DP73 79 aa4.97□□□□□ -1.61
HDAC9-227ENST00000523867 DEFB130AP0DP74 79 aa4.97□□□□□ -1.61
HDAC9-227ENST00000523867 INAFM1C9JVW0 142 aa4.96□□□□□ -1.61
HDAC9-227ENST00000523867 IGLV1-51P01701 117 aa4.96□□□□□ -1.61
HDAC9-227ENST00000523867 MUC7Q8TAX7 377 aa4.96□□□□□ -1.61
HDAC9-227ENST00000523867 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.61
HDAC9-227ENST00000523867 PSCAO43653 123 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 LINC00269Q8N2A0 174 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 LINC01006Q8NI28 216 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 M0R2N4 97 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 CELA1Q9UNI1 258 aa4.95□□□□□ -1.62
HDAC9-227ENST00000523867 Q5VV11 94 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 CLPSL2Q6UWE3 100 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 Q8IZM0 81 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 ZCCHC13Q8WW36 166 aaKnown RBP4.94□□□□□ -1.62
HDAC9-227ENST00000523867 DIRC1Q969H9 104 aa4.94□□□□□ -1.62
HDAC9-227ENST00000523867 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 A0A096LPF7 62 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 A6NN06 94 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 SMR3AQ99954 134 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 COX17Q14061 63 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
HDAC9-227ENST00000523867 NDUFB1O75438 58 aa4.92□□□□□ -1.62
HDAC9-227ENST00000523867 ELOF1P60002 83 aaKnown RBP4.92□□□□□ -1.62
HDAC9-227ENST00000523867 PRO0255Q9UI72 69 aa4.92□□□□□ -1.62
HDAC9-227ENST00000523867 COX7BP24311 80 aa4.91□□□□□ -1.62
HDAC9-227ENST00000523867 LINC00612Q8N6U2 182 aa4.91□□□□□ -1.62
HDAC9-227ENST00000523867 LRCOL1A6NCL2 159 aa4.91□□□□□ -1.62
HDAC9-227ENST00000523867 HCG22E2RYF7 251 aa4.9□□□□□ -1.62
HDAC9-227ENST00000523867 HIVEP2P31629 2446 aa4.9□□□□□ -1.63
HDAC9-227ENST00000523867 IGLV10-54A0A075B6I4 117 aa4.9□□□□□ -1.63
HDAC9-227ENST00000523867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
HDAC9-227ENST00000523867 CHKB-CPT1BH3BT56 60 aa4.89□□□□□ -1.63
HDAC9-227ENST00000523867 ANGP03950 147 aaKnown RBP4.89□□□□□ -1.63
HDAC9-227ENST00000523867 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
HDAC9-227ENST00000523867 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
HDAC9-227ENST00000523867 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
HDAC9-227ENST00000523867 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-227ENST00000523867 NBEAL2Q6ZNJ1 2754 aa4.88□□□□□ -1.63
HDAC9-227ENST00000523867 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
HDAC9-227ENST00000523867 A0A1B0GW54 56 aa4.88□□□□□ -1.63
HDAC9-227ENST00000523867 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
HDAC9-227ENST00000523867 Q6ZQY7 126 aa4.87□□□□□ -1.63
HDAC9-227ENST00000523867 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
HDAC9-227ENST00000523867 LOC101927531A0A1B0GV80 90 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 ETDCA0A1B0GVM5 59 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 DEFB4AO15263 64 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 Q8NDZ9 215 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 Q9BRP9 147 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 A8MU10 97 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-227ENST00000523867 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 VWFP04275 2813 aa4.86□□□□□ -1.63
HDAC9-227ENST00000523867 UNQ6190/PRO20217Q6UXQ8 127 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 Q8N9L7 120 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 SPAG11BQ08648 103 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 C10orf25Q5T742 122 aa4.85□□□□□ -1.63
HDAC9-227ENST00000523867 IGHV4-30-4P0DP06 118 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 DEFB135Q30KP9 77 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 B9D2Q9BPU9 175 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 HIGD2BQ4VC39 106 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
HDAC9-227ENST00000523867 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-227ENST00000523867 KRTAP10-3P60369 221 aa4.83□□□□□ -1.64
HDAC9-227ENST00000523867 A0A0J9YWU9 116 aa4.83□□□□□ -1.64
HDAC9-227ENST00000523867 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
HDAC9-227ENST00000523867 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
HDAC9-227ENST00000523867 A6NED7 52 aa4.82□□□□□ -1.64
HDAC9-227ENST00000523867 HTN3P15516 51 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms