RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 DEFB124Q8NES8 71 aa5.14□□□□□ -1.59
HMGB4-204ENST00000522796 CAMK2N2Q96S95 79 aa5.14□□□□□ -1.59
HMGB4-204ENST00000522796 SPTBN2O15020 2390 aa5.13□□□□□ -1.59
HMGB4-204ENST00000522796 RIF1Q5UIP0 2472 aaKnown RBP5.13□□□□□ -1.59
HMGB4-204ENST00000522796 A0A1W2PNU3 283 aaPredicted RBP5.13□□□□□ -1.59
HMGB4-204ENST00000522796 UNQ6190/PRO20217Q6UXQ8 127 aa5.13□□□□□ -1.59
HMGB4-204ENST00000522796 LOC400499M0QZD8 3231 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 CSMD1Q96PZ7 3565 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 IGLV10-54A0A075B6I4 117 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 IGLV5-52A0A0A0MRZ9 124 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 DEFB131AP59861 70 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 WNK1Q9H4A3 2382 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 A6NDX4 124 aa5.12□□□□□ -1.59
HMGB4-204ENST00000522796 CNOT1A5YKK6 2376 aaKnown RBP5.11□□□□□ -1.59
HMGB4-204ENST00000522796 SPTBN4Q9H254 2564 aa5.1□□□□□ -1.59
HMGB4-204ENST00000522796 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
HMGB4-204ENST00000522796 IGKV2-24A0A0C4DH68 120 aa5.09□□□□□ -1.59
HMGB4-204ENST00000522796 CLPSL2Q6UWE3 100 aa5.09□□□□□ -1.59
HMGB4-204ENST00000522796 DHRS4-AS1Q9P1J3 65 aa5.09□□□□□ -1.59
HMGB4-204ENST00000522796 KRTAP26-1Q6PEX3 210 aa5.08□□□□□ -1.6
HMGB4-204ENST00000522796 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
HMGB4-204ENST00000522796 PCNX1Q96RV3 2341 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 DMXL2Q8TDJ6 3036 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 NUPR2A6NF83 97 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 CEP295Q9C0D2 2601 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 BOD1L1Q8NFC6 3051 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 BSNQ9UPA5 3926 aa5.07□□□□□ -1.6
HMGB4-204ENST00000522796 RPL37AP61513 92 aaKnown RBP5.06□□□□□ -1.6
HMGB4-204ENST00000522796 ATMQ13315 3056 aa5.06□□□□□ -1.6
HMGB4-204ENST00000522796 CIRBP-AS1Q8TBR5 109 aa5.05□□□□□ -1.6
HMGB4-204ENST00000522796 ACYP2P14621 99 aa5.05□□□□□ -1.6
HMGB4-204ENST00000522796 LINC00472Q9H8W2 130 aa5.05□□□□□ -1.6
HMGB4-204ENST00000522796 C6orf48Q9UBA6 75 aa5.05□□□□□ -1.6
HMGB4-204ENST00000522796 DSPP15924 2871 aaKnown RBP5.05□□□□□ -1.6
HMGB4-204ENST00000522796 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
HMGB4-204ENST00000522796 RP1L1Q8IWN7 2480 aaPredicted RBP5.04□□□□□ -1.6
HMGB4-204ENST00000522796 PTPRZ1P23471 2315 aaPredicted RBP5.04□□□□□ -1.6
HMGB4-204ENST00000522796 TLX1NBP0CAT3 122 aa5.04□□□□□ -1.6
HMGB4-204ENST00000522796 SMG1Q96Q15 3661 aaKnown RBP5.03□□□□□ -1.6
HMGB4-204ENST00000522796 APC2O95996 2303 aa5.03□□□□□ -1.6
HMGB4-204ENST00000522796 ANKRD11Q6UB99 2663 aaPredicted RBP5.03□□□□□ -1.6
HMGB4-204ENST00000522796 MMP24-AS1A0A0U1RRL7 71 aa5.03□□□□□ -1.6
HMGB4-204ENST00000522796 DEFB109BQ30KR1 87 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 Q6ZRX8 168 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 ROS1P08922 2347 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 IGF2RP11717 2491 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 MAP1BP46821 2468 aaKnown RBP5.02□□□□□ -1.61
HMGB4-204ENST00000522796 Q5W150 140 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 BRD3OSQ6XYD6 125 aa5.02□□□□□ -1.61
HMGB4-204ENST00000522796 PRRC2CQ9Y520 2896 aaKnown RBP5.02□□□□□ -1.61
HMGB4-204ENST00000522796 ITPR1Q14643 2758 aa5.01□□□□□ -1.61
HMGB4-204ENST00000522796 TPRP12270 2363 aaKnown RBP5.01□□□□□ -1.61
HMGB4-204ENST00000522796 CACNA1BQ00975 2339 aa5.01□□□□□ -1.61
HMGB4-204ENST00000522796 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
HMGB4-204ENST00000522796 C16orf74Q96GX8 76 aa5.01□□□□□ -1.61
HMGB4-204ENST00000522796 CHD8Q9HCK8 2581 aa5.01□□□□□ -1.61
HMGB4-204ENST00000522796 IGFL1Q6UW32 110 aa5□□□□□ -1.61
HMGB4-204ENST00000522796 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
HMGB4-204ENST00000522796 A0A087WTM6 91 aa4.99□□□□□ -1.61
HMGB4-204ENST00000522796 FAM168BA1KXE4 195 aa4.99□□□□□ -1.61
HMGB4-204ENST00000522796 ANGP03950 147 aaKnown RBP4.99□□□□□ -1.61
HMGB4-204ENST00000522796 NCOR2Q9Y618 2525 aa4.98□□□□□ -1.61
HMGB4-204ENST00000522796 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
HMGB4-204ENST00000522796 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
HMGB4-204ENST00000522796 CACNA1AO00555 2505 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 IGLV8-61A0A075B6I0 122 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 AKAP6Q13023 2319 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 TACC2O95359 2948 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 PIEZO1Q92508 2521 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 IGLV7-43P04211 117 aa4.97□□□□□ -1.61
HMGB4-204ENST00000522796 PIEZO2Q9H5I5 2752 aa4.96□□□□□ -1.61
HMGB4-204ENST00000522796 A0A1B0GVX0 72 aa4.96□□□□□ -1.61
HMGB4-204ENST00000522796 LINC00304Q8N9R0 145 aa4.96□□□□□ -1.61
HMGB4-204ENST00000522796 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.62
HMGB4-204ENST00000522796 ACACAQ13085 2346 aa4.96□□□□□ -1.62
HMGB4-204ENST00000522796 LY6EQ16553 131 aa4.95□□□□□ -1.62
HMGB4-204ENST00000522796 SPRR1AP35321 89 aa4.95□□□□□ -1.62
HMGB4-204ENST00000522796 DEFB136Q30KP8 78 aa4.94□□□□□ -1.62
HMGB4-204ENST00000522796 CHD6Q8TD26 2715 aa4.94□□□□□ -1.62
HMGB4-204ENST00000522796 COL6A6A6NMZ7 2263 aa4.93□□□□□ -1.62
HMGB4-204ENST00000522796 CCL19Q99731 98 aa4.93□□□□□ -1.62
HMGB4-204ENST00000522796 H3BUX3 64 aa4.92□□□□□ -1.62
HMGB4-204ENST00000522796 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
HMGB4-204ENST00000522796 A0A1W2PNN7 141 aa4.92□□□□□ -1.62
HMGB4-204ENST00000522796 RELNP78509 3460 aa4.92□□□□□ -1.62
HMGB4-204ENST00000522796 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB4-204ENST00000522796 USP24Q9UPU5 2620 aa4.91□□□□□ -1.62
HMGB4-204ENST00000522796 ATRXP46100 2492 aa4.91□□□□□ -1.62
HMGB4-204ENST00000522796 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
HMGB4-204ENST00000522796 C2CD3Q4AC94 2353 aa4.9□□□□□ -1.62
HMGB4-204ENST00000522796 PKD1L2Q7Z442 2459 aa4.9□□□□□ -1.62
HMGB4-204ENST00000522796 PANO1I0J062 215 aa4.9□□□□□ -1.62
HMGB4-204ENST00000522796 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
HMGB4-204ENST00000522796 TLN1Q9Y490 2541 aaKnown RBP4.89□□□□□ -1.63
HMGB4-204ENST00000522796 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
HMGB4-204ENST00000522796 Q96NJ1 140 aa4.88□□□□□ -1.63
HMGB4-204ENST00000522796 PRO0255Q9UI72 69 aa4.88□□□□□ -1.63
HMGB4-204ENST00000522796 SLURP1P55000 103 aa4.88□□□□□ -1.63
HMGB4-204ENST00000522796 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
HMGB4-204ENST00000522796 C15orf56Q8N910 161 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms