RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NDUFA12Q9UI09 145 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 UBE2D4Q9Y2X8 147 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 USP24Q9UPU5 2620 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 CSMD1Q96PZ7 3565 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 DMXL2Q8TDJ6 3036 aa1.37□□□□□ -2.19
HMGN1P28-201ENST00000521340 POLQO75417 2590 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 LRBAP50851 2863 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGKV3-7A0A075B6H7 116 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRAV4A0A0B4J268 109 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 TEX49A0A1B0GTD5 131 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 TMEM262E9PQX1 116 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 LINC00694P0DN24 101 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 IFITM1P13164 125 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 FLNAP21333 2647 aaKnown RBP1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 SOSTDC1Q6X4U4 206 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 Q6ZTI0 123 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 MUSTN1Q8IVN3 82 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 Q8N2B8 174 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 DEFB104AQ8WTQ1 72 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 CLEC2BQ92478 149 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 ZNF625Q96I27 306 aaPredicted RBP1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 C22orf24Q9Y442 160 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 ABCA12Q86UK0 2595 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 MYO18BQ8IUG5 2567 aa1.36□□□□□ -2.19
HMGN1P28-201ENST00000521340 SETXQ7Z333 2677 aaKnown RBP1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 TACC2O95359 2948 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 RELNP78509 3460 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 IGKV2-29A2NJV5 120 aaPredicted RBP1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 B4DSR2 109 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 CCDC179H3BU77 68 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 H7C2G1 150 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 SNCGO76070 127 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRACP01848 142 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 DEFB131AP59861 70 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 HIST1H4AP62805 103 aaKnown RBP1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 DEFB136Q30KP8 78 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 DEFB112Q30KQ8 113 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 TEX29Q8N6K0 151 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 C9orf163Q8N9P6 203 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 C15orf53Q8NAA6 179 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 LINC00308Q8TCZ7 52 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 C4orf3Q8WVX3 66 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 C11orf68Q9H3H3 251 aaKnown RBP1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 CDKN2A-AS1Q9UH64 79 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 SS18L2Q9UHA2 77 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 EPG5Q9HCE0 2579 aa1.35□□□□□ -2.19
HMGN1P28-201ENST00000521340 ZFYVE26Q68DK2 2539 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 FLNCQ14315 2725 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 LAMA5O15230 3695 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 TRBV10-1A0A0K0K1A3 114 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 CRPP02741 224 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 PRM2P04554 102 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 ACYP1P07311 99 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 COX6CP09669 75 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 NPC2P61916 151 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 COX6A2Q02221 97 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 COPS9Q8WXC6 57 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 IMUPQ9GZP8 106 aa1.34□□□□□ -2.19
HMGN1P28-201ENST00000521340 CCDC168Q8NDH2 2452 aa1.34□□□□□ -2.2
HMGN1P28-201ENST00000521340 CFAP46Q8IYW2 2715 aa1.34□□□□□ -2.2
HMGN1P28-201ENST00000521340 MTORP42345 2549 aa1.34□□□□□ -2.2
HMGN1P28-201ENST00000521340 ITPR1Q14643 2758 aa1.34□□□□□ -2.2
HMGN1P28-201ENST00000521340 ZANQ9Y493 2812 aa1.34□□□□□ -2.2
HMGN1P28-201ENST00000521340 ACANP16112 2415 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 FAM236AA0A1B0GUQ0 79 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 FAM236BA0A1B0GV22 79 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 DEFB114Q30KQ6 69 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 MEIG1Q5JSS6 88 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 Q6JHZ5 121 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 C5orf38Q86SI9 138 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 LINC00643Q86TS7 51 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 DYNLRB2Q8TF09 96 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 CDC42SE2Q9NRR3 84 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 ZNF462Q96JM2 2506 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 SETD2Q9BYW2 2564 aaPredicted RBP1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 AKAP9Q99996 3911 aa1.33□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRGV1A0A0A0MS02 117 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRAV13-1A0A0B4J241 112 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 IBA57-AS1B1ANH7 110 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 UQCRQO14949 82 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 HTN1P15515 57 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 CCL18P55774 89 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 CIRBPQ14011 172 aaKnown RBP1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 ATP5EP2Q5VTU8 51 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 COX7B2Q8TF08 81 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 LINC00526Q96FQ7 95 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 CHD6Q8TD26 2715 aa1.32□□□□□ -2.2
HMGN1P28-201ENST00000521340 UBR5O95071 2799 aaPredicted RBP1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 CELSR1Q9NYQ6 3014 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 GCN1Q92616 2671 aaKnown RBP1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRBV6-8A0A0A6YYG3 113 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms