RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZCCHC13Q8WW36 166 aaKnown RBP1.66□□□□□ -2.14
VPS13B-207ENST00000518569 FAM103A1Q9BTL3 118 aaKnown RBP1.66□□□□□ -2.14
VPS13B-207ENST00000518569 PSENENQ9NZ42 101 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 KLK9Q9UKQ9 250 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 UBE2D4Q9Y2X8 147 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 MDC1Q14676 2089 aaKnown RBP1.66□□□□□ -2.14
VPS13B-207ENST00000518569 FBN1P35555 2871 aaKnown RBP1.66□□□□□ -2.14
VPS13B-207ENST00000518569 TRPM6Q9BX84 2022 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 F8VRH5 84 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 UQCR11O14957 56 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 PLXNB1O43157 2135 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 MGPP08493 103 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 CCL3L1P16619 93 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 PDE6GP18545 87 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 COX17Q14061 63 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 TOMM5Q8N4H5 51 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 DEFB119Q8N690 84 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 PRR15LQ9BU68 103 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 SCN3AQ9NY46 2000 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 SHANK1Q9Y566 2161 aa1.65□□□□□ -2.15
VPS13B-207ENST00000518569 TGP01266 2768 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 VPS13CQ709C8 3753 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 ZNF407Q9C0G0 2248 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 ZGRF1Q86YA3 2104 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 CSMD2Q7Z408 3487 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 PKD1L1Q8TDX9 2849 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 FN1P02751 2386 aaKnown RBP1.64□□□□□ -2.15
VPS13B-207ENST00000518569 JMJD1CQ15652 2540 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 HIVEP2P31629 2446 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 IGKV3-7A0A075B6H7 116 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 TRBV6-5A0A0K0K1A5 114 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 A0A1B0GUT8 65 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 SPINT3P49223 89 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 TMEM14CQ9P0S9 112 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 CCL26Q9Y258 94 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 V9GYV3 84 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 PKDREJQ9NTG1 2253 aa1.64□□□□□ -2.15
VPS13B-207ENST00000518569 STAB1Q9NY15 2570 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 UNC13CQ8NB66 2214 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 CTXND1A0A1B0GTU2 59 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 SMIM4Q8WVI0 70 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 LINC00846Q9NV44 126 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 MUC4Q99102 2169 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 CACNA1CQ13936 2221 aa1.63□□□□□ -2.15
VPS13B-207ENST00000518569 FLNAP21333 2647 aaKnown RBP1.63□□□□□ -2.15
VPS13B-207ENST00000518569 MXRA5Q9NR99 2828 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 ACANP16112 2415 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 SEC16AO15027 2179 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 CNTRLQ7Z7A1 2325 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 PRH1P02810 166 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 CCL18P55774 89 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 MYO7BQ6PIF6 2116 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 ZNF563Q8TA94 476 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 WFDC10AQ9H1F0 79 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 CSPG4Q6UVK1 2322 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
VPS13B-207ENST00000518569 NSD1Q96L73 2696 aaPredicted RBP1.62□□□□□ -2.15
VPS13B-207ENST00000518569 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
VPS13B-207ENST00000518569 TRBV7-4A0A0J9YYF1 115 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 CLPSL1A2RUU4 121 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
VPS13B-207ENST00000518569 RPL37AP61513 92 aaKnown RBP1.61□□□□□ -2.15
VPS13B-207ENST00000518569 C10orf55Q5SWW7 151 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 NMES1Q9C002 83 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 ANKRD36A6QL64 1941 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 NOTCH1P46531 2555 aa1.61□□□□□ -2.15
VPS13B-207ENST00000518569 SNRNP200O75643 2136 aaKnown RBP1.6□□□□□ -2.15
VPS13B-207ENST00000518569 FREM3P0C091 2139 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 CUBNO60494 3623 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 MALRD1Q5VYJ5 2156 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 H0Y9P7 68 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 M0R135 149 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 IGLV3-1P01715 115 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 LINC00322Q6ZN03 302 aaPredicted RBP1.6□□□□□ -2.15
VPS13B-207ENST00000518569 DEFB107AQ8IZN7 70 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 TXNDC17Q9BRA2 123 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 AKAP6Q13023 2319 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 TLN2Q9Y4G6 2542 aa1.6□□□□□ -2.15
VPS13B-207ENST00000518569 A0A0G2JQZ4 141 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 TRBV30A0A0K0K1B3 111 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 LINC01549A6NIU2 74 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 SERF2P84101 59 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 UBL5Q9BZL1 73 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 PROK2Q9HC23 129 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 SNURFQ9Y675 71 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 NBEAL2Q6ZNJ1 2754 aa1.59□□□□□ -2.15
VPS13B-207ENST00000518569 HRNRQ86YZ3 2850 aaPredicted RBP1.59□□□□□ -2.16
VPS13B-207ENST00000518569 ABCA4P78363 2273 aa1.59□□□□□ -2.16
VPS13B-207ENST00000518569 CPAMD8Q8IZJ3 1885 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 ZANQ9Y493 2812 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
VPS13B-207ENST00000518569 ZNF469Q96JG9 3925 aaPredicted RBP1.58□□□□□ -2.16
VPS13B-207ENST00000518569 EXPH5Q8NEV8 1989 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 A0A087WVE0 104 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 H3BRN7 92 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms