RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
MATR3-226ENST00000515833 NMES1Q9C002 83 aa1.43□□□□□ -2.18
MATR3-226ENST00000515833 ABCA5Q8WWZ7 1642 aa1.43□□□□□ -2.18
MATR3-226ENST00000515833 NRXN3Q9Y4C0 1643 aa1.43□□□□□ -2.18
MATR3-226ENST00000515833 TJP1Q07157 1748 aa1.43□□□□□ -2.18
MATR3-226ENST00000515833 DDX60LQ5H9U9 1706 aaKnown RBP1.43□□□□□ -2.18
MATR3-226ENST00000515833 TOP2AP11388 1531 aaKnown RBP1.42□□□□□ -2.18
MATR3-226ENST00000515833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.188e-8■■■■□ 26.2
MATR3-226ENST00000515833 K7EQZ3 153 aa1.42□□□□□ -2.18
MATR3-226ENST00000515833 ABCC8Q09428 1581 aa1.42□□□□□ -2.18
MATR3-226ENST00000515833 DOPEY2Q9Y3R5 2298 aa1.41□□□□□ -2.18
MATR3-226ENST00000515833 I3L3M4 83 aa1.41□□□□□ -2.18
MATR3-226ENST00000515833 CCL22O00626 93 aa1.41□□□□□ -2.18
MATR3-226ENST00000515833 ANKRD36CQ5JPF3 1778 aa1.41□□□□□ -2.18
MATR3-226ENST00000515833 TNRC6CQ9HCJ0 1690 aaKnown RBP1.4□□□□□ -2.19
MATR3-226ENST00000515833 IQGAP2Q13576 1575 aa1.4□□□□□ -2.19
MATR3-226ENST00000515833 FCER1GP30273 86 aa1.4□□□□□ -2.19
MATR3-226ENST00000515833 CMC2Q9NRP2 79 aa1.4□□□□□ -2.19
MATR3-226ENST00000515833 MRPL34Q9BQ48 92 aaKnown RBP1.39□□□□□ -2.19
MATR3-226ENST00000515833 KIAA0586Q9BVV6 1533 aa1.39□□□□□ -2.19
MATR3-226ENST00000515833 PTPRZ1P23471 2315 aaPredicted RBP1.39□□□□□ -2.19
MATR3-226ENST00000515833 IGIPA6NJ69 53 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 COX6A2Q02221 97 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 Q5VSD8 79 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 NCBP2-AS2Q69YL0 99 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 Q8IZM0 81 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 BPTFQ12830 3046 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 PLCE1Q9P212 2302 aa1.38□□□□□ -2.19
MATR3-226ENST00000515833 ASH1LQ9NR48 2969 aaKnown RBP1.37□□□□□ -2.19
MATR3-226ENST00000515833 A0A0D9SG42 100 aa1.37□□□□□ -2.19
MATR3-226ENST00000515833 PIEZO2Q9H5I5 2752 aa1.36□□□□□ -2.19
MATR3-226ENST00000515833 PLNP26678 52 aa1.36□□□□□ -2.19
MATR3-226ENST00000515833 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
MATR3-226ENST00000515833 AGLP35573 1532 aa1.35□□□□□ -2.19
MATR3-226ENST00000515833 C2CD3Q4AC94 2353 aa1.35□□□□□ -2.19
MATR3-226ENST00000515833 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
MATR3-226ENST00000515833 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
MATR3-226ENST00000515833 M0R1W7 72 aa1.34□□□□□ -2.19
MATR3-226ENST00000515833 COX6B1P14854 86 aa1.34□□□□□ -2.19
MATR3-226ENST00000515833 CACNA1HO95180 2353 aa1.33□□□□□ -2.2
MATR3-226ENST00000515833 PTPRQQ9UMZ3 2332 aa1.32□□□□□ -2.2
MATR3-226ENST00000515833 SPTBN2O15020 2390 aa1.32□□□□□ -2.2
MATR3-226ENST00000515833 PRH1P02810 166 aa1.32□□□□□ -2.2
MATR3-226ENST00000515833 TOMM5Q8N4H5 51 aa1.32□□□□□ -2.2
MATR3-226ENST00000515833 DEPDC5O75140 1603 aa1.32□□□□□ -2.2
MATR3-226ENST00000515833 LYNX1G3V0Z9 82 aa1.31□□□□□ -2.2
MATR3-226ENST00000515833 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
MATR3-226ENST00000515833 FAM208AQ9UK61 1670 aaKnown RBP1.31□□□□□ -2.2
MATR3-226ENST00000515833 LINC01546A6NGU7 62 aa1.3□□□□□ -2.2
MATR3-226ENST00000515833 H0YGX0 51 aa1.3□□□□□ -2.2
MATR3-226ENST00000515833 CRIP1P50238 77 aa1.3□□□□□ -2.2
MATR3-226ENST00000515833 USF3Q68DE3 2245 aa1.3□□□□□ -2.2
MATR3-226ENST00000515833 CDKN2A-AS1Q9UH64 79 aa1.29□□□□□ -2.2
MATR3-226ENST00000515833 C4AP0C0L4 1744 aa1.29□□□□□ -2.2
MATR3-226ENST00000515833 C4BP0C0L5 1744 aa1.29□□□□□ -2.2
MATR3-226ENST00000515833 SMIM27A0A1W2PRY6 76 aa1.28□□□□□ -2.2
MATR3-226ENST00000515833 SPRR1AP35321 89 aa1.28□□□□□ -2.2
MATR3-226ENST00000515833 PRO3102Q9H379 93 aa1.28□□□□□ -2.2
MATR3-226ENST00000515833 ABRACLQ9P1F3 81 aa1.28□□□□□ -2.2
MATR3-226ENST00000515833 TOGARAM1Q9Y4F4 1720 aa1.26□□□□□ -2.21
MATR3-226ENST00000515833 ALMS1Q8TCU4 4167 aa1.26□□□□□ -2.21
MATR3-226ENST00000515833 NDUFA3O95167 84 aa1.26□□□□□ -2.21
MATR3-226ENST00000515833 ZNF462Q96JM2 2506 aa1.26□□□□□ -2.21
MATR3-226ENST00000515833 HELZ2Q9BYK8 2649 aaKnown RBP1.25□□□□□ -2.21
MATR3-226ENST00000515833 ATP7AQ04656 1500 aa1.25□□□□□ -2.21
MATR3-226ENST00000515833 SPTBN1Q01082 2364 aaKnown RBP1.25□□□□□ -2.21
MATR3-226ENST00000515833 H0YAA0 97 aa1.24□□□□□ -2.21
MATR3-226ENST00000515833 LINC00158P58513 81 aa1.24□□□□□ -2.21
MATR3-226ENST00000515833 MEGF8Q7Z7M0 2845 aa1.24□□□□□ -2.21
MATR3-226ENST00000515833 SPRR1BP22528 89 aa1.23□□□□□ -2.21
MATR3-226ENST00000515833 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
MATR3-226ENST00000515833 TMEM167BQ9NRX6 74 aa1.23□□□□□ -2.21
MATR3-226ENST00000515833 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
MATR3-226ENST00000515833 TTC28Q96AY4 2481 aa1.22□□□□□ -2.21
MATR3-226ENST00000515833 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
MATR3-226ENST00000515833 WNK2Q9Y3S1 2297 aa1.21□□□□□ -2.22
MATR3-226ENST00000515833 CDC42BPAQ5VT25 1732 aa1.2□□□□□ -2.22
MATR3-226ENST00000515833 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
MATR3-226ENST00000515833 APLNQ9ULZ1 77 aa1.2□□□□□ -2.22
MATR3-226ENST00000515833 F8P00451 2351 aa1.2□□□□□ -2.22
MATR3-226ENST00000515833 TRPM2O94759 1503 aa1.2□□□□□ -2.22
MATR3-226ENST00000515833 DDX60Q8IY21 1712 aaKnown RBP1.19□□□□□ -2.22
MATR3-226ENST00000515833 POLQO75417 2590 aa1.19□□□□□ -2.22
MATR3-226ENST00000515833 IQGAP1P46940 1657 aa1.19□□□□□ -2.22
MATR3-226ENST00000515833 GVINP1Q7Z2Y8 2422 aa1.18□□□□□ -2.22
MATR3-226ENST00000515833 SAMD9LQ8IVG5 1584 aa1.18□□□□□ -2.22
MATR3-226ENST00000515833 SPINK4O60575 86 aa1.18□□□□□ -2.22
MATR3-226ENST00000515833 LELP1Q5T871 98 aa1.18□□□□□ -2.22
MATR3-226ENST00000515833 WFDC13Q8IUB5 93 aa1.18□□□□□ -2.22
MATR3-226ENST00000515833 LMO7Q8WWI1 1683 aa1.17□□□□□ -2.22
MATR3-226ENST00000515833 NFAT5O94916 1531 aa1.17□□□□□ -2.22
MATR3-226ENST00000515833 MINOS1Q5TGZ0 78 aa1.16□□□□□ -2.22
MATR3-226ENST00000515833 LINC00308Q8TCZ7 52 aa1.15□□□□□ -2.23
MATR3-226ENST00000515833 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.23
MATR3-226ENST00000515833 REV3LO60673 3130 aa1.14□□□□□ -2.23
MATR3-226ENST00000515833 ZNF292O60281 2723 aa1.14□□□□□ -2.23
MATR3-226ENST00000515833 KNL1Q8NG31 2342 aa1.14□□□□□ -2.23
MATR3-226ENST00000515833 LOC730098B7Z3J9 87 aa1.14□□□□□ -2.23
MATR3-226ENST00000515833 IAPPP10997 89 aa1.14□□□□□ -2.23
MATR3-226ENST00000515833 ABCA12Q86UK0 2595 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms