RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
MATR3-223ENST00000514402 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
MATR3-223ENST00000514402 ABCA12Q86UK0 2595 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 PTPRQQ9UMZ3 2332 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 KLK9Q2XQG4 91 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 ENHOQ6UWT2 76 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
MATR3-223ENST00000514402 BDP1A6H8Y1 2624 aa0.59□□□□□ -2.31
MATR3-223ENST00000514402 DDX60LQ5H9U9 1706 aaKnown RBP0.59□□□□□ -2.31
MATR3-223ENST00000514402 C3orf79P0CE67 100 aa0.59□□□□□ -2.31
MATR3-223ENST00000514402 S100ZQ8WXG8 99 aa0.59□□□□□ -2.31
MATR3-223ENST00000514402 PIEZO2Q9H5I5 2752 aa0.59□□□□□ -2.32
MATR3-223ENST00000514402 RALGAPBQ86X10 1494 aa0.59□□□□□ -2.32
MATR3-223ENST00000514402 SPTBN1Q01082 2364 aaKnown RBP0.59□□□□□ -2.32
MATR3-223ENST00000514402 PRH1P02810 166 aa0.58□□□□□ -2.32
MATR3-223ENST00000514402 DEFB109BQ30KR1 87 aa0.58□□□□□ -2.32
MATR3-223ENST00000514402 TIAM1Q13009 1591 aa0.57□□□□□ -2.32
MATR3-223ENST00000514402 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
MATR3-223ENST00000514402 NDUFA3O95167 84 aa0.57□□□□□ -2.32
MATR3-223ENST00000514402 ABCA6Q8N139 1617 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 TPRP12270 2363 aaKnown RBP0.56□□□□□ -2.32
MATR3-223ENST00000514402 C4AP0C0L4 1744 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 C4BP0C0L5 1744 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 SFTA3P0C7M3 94 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 COX6B2Q6YFQ2 88 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 SMR3AQ99954 134 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 CDKN2A-AS1Q9UH64 79 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 GVINP1Q7Z2Y8 2422 aa0.56□□□□□ -2.32
MATR3-223ENST00000514402 TJP1Q07157 1748 aa0.55□□□□□ -2.32
MATR3-223ENST00000514402 CNOT1A5YKK6 2376 aaKnown RBP0.55□□□□□ -2.32
MATR3-223ENST00000514402 LINC01549A6NIU2 74 aa0.55□□□□□ -2.32
MATR3-223ENST00000514402 UBL5Q9BZL1 73 aa0.55□□□□□ -2.32
MATR3-223ENST00000514402 RNF17Q9BXT8 1623 aaKnown RBP0.55□□□□□ -2.32
MATR3-223ENST00000514402 TNCP24821 2201 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 GLI2P10070 1586 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 SPINK4O60575 86 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 WFDC13Q8IUB5 93 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 KCNQ1DNQ9H478 68 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 ZNF292O60281 2723 aa0.54□□□□□ -2.32
MATR3-223ENST00000514402 SPINK1P00995 79 aa0.53□□□□□ -2.32
MATR3-223ENST00000514402 AKAP6Q13023 2319 aa0.53□□□□□ -2.33
MATR3-223ENST00000514402 DEFB131BA0A096LNP1 70 aa0.52□□□□□ -2.33
MATR3-223ENST00000514402 PRO3102Q9H379 93 aa0.52□□□□□ -2.33
MATR3-223ENST00000514402 ABCC6O95255 1503 aa0.52□□□□□ -2.33
MATR3-223ENST00000514402 C3P01024 1663 aa0.52□□□□□ -2.33
MATR3-223ENST00000514402 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
MATR3-223ENST00000514402 MRPL33O75394 65 aaKnown RBP0.51□□□□□ -2.33
MATR3-223ENST00000514402 LINC00158P58513 81 aa0.51□□□□□ -2.33
MATR3-223ENST00000514402 ANK2Q01484 3957 aa0.51□□□□□ -2.33
MATR3-223ENST00000514402 SMIM5Q71RC9 77 aa0.51□□□□□ -2.33
MATR3-223ENST00000514402 CSMD3Q7Z407 3707 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 ALS2Q96Q42 1657 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 PLXNC1O60486 1568 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 ABCA10Q8WWZ4 1543 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 PRXQ9BXM0 1461 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 ETDCA0A1B0GVM5 59 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 H0YAA0 97 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 CELSR2Q9HCU4 2923 aa0.5□□□□□ -2.33
MATR3-223ENST00000514402 THOC2Q8NI27 1593 aaKnown RBP0.49□□□□□ -2.33
MATR3-223ENST00000514402 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
MATR3-223ENST00000514402 PREX2Q70Z35 1606 aa0.49□□□□□ -2.33
MATR3-223ENST00000514402 CRIP1P50238 77 aa0.48□□□□□ -2.33
MATR3-223ENST00000514402 DEFB114Q30KQ6 69 aa0.48□□□□□ -2.33
MATR3-223ENST00000514402 U3KQA8 63 aa0.48□□□□□ -2.33
MATR3-223ENST00000514402 DEPDC5O75140 1603 aa0.48□□□□□ -2.33
MATR3-223ENST00000514402 EEA1Q15075 1411 aa0.47□□□□□ -2.33
MATR3-223ENST00000514402 LY75O60449 1722 aa0.47□□□□□ -2.33
MATR3-223ENST00000514402 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
MATR3-223ENST00000514402 CPS1P31327 1500 aa0.47□□□□□ -2.33
MATR3-223ENST00000514402 UGGT1Q9NYU2 1555 aa0.46□□□□□ -2.34
MATR3-223ENST00000514402 APCP25054 2843 aa0.46□□□□□ -2.34
MATR3-223ENST00000514402 FCER1GP30273 86 aa0.46□□□□□ -2.34
MATR3-223ENST00000514402 KNL1Q8NG31 2342 aa0.46□□□□□ -2.34
MATR3-223ENST00000514402 MAST1Q9Y2H9 1570 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 CHD9Q3L8U1 2897 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 KIAA0586Q9BVV6 1533 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 LOC730098B7Z3J9 87 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 K7EMI3 77 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 IGF2RP11717 2491 aa0.45□□□□□ -2.34
MATR3-223ENST00000514402 LYNX1G3V0Z9 82 aa0.44□□□□□ -2.34
MATR3-223ENST00000514402 M0R1W7 72 aa0.44□□□□□ -2.34
MATR3-223ENST00000514402 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
MATR3-223ENST00000514402 MROH2AA6NES4 1674 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 ITSN2Q9NZM3 1697 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 IAPPP10997 89 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 SYCP2Q9BX26 1530 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 CROCC2H7BZ55 1655 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 KIF1AQ12756 1690 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 WNK2Q9Y3S1 2297 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 NCOR1O75376 2440 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 SPTA1P02549 2419 aa0.43□□□□□ -2.34
MATR3-223ENST00000514402 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
MATR3-223ENST00000514402 DEFB130BP0DP73 79 aa0.42□□□□□ -2.34
MATR3-223ENST00000514402 DEFB130AP0DP74 79 aa0.42□□□□□ -2.34
MATR3-223ENST00000514402 NCBP2-AS2Q69YL0 99 aa0.42□□□□□ -2.34
MATR3-223ENST00000514402 KMT2DO14686 5537 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms